Protein–RNA interactions for Protein: P80205

Otx1, Homeobox protein OTX1, mousemouse

Predictions only

Length 355 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Otx1P80205 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.42□□□□□ -0.42
Otx1P80205 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.42□□□□□ -0.42
Otx1P80205 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Otx1P80205 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Cacnb1-201ENSMUST00000017552 3396 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC12.42□□□□□ -0.42
Otx1P80205 Ggn-202ENSMUST00000098609 2653 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Ttll11-201ENSMUST00000028248 3176 ntAPPRIS P2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Miga1-204ENSMUST00000199334 4024 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Gm14701-201ENSMUST00000117156 348 ntBASIC12.42□□□□□ -0.42
Otx1P80205 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Rabep1-208ENSMUST00000179114 1264 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC12.42□□□□□ -0.42
Otx1P80205 Hnrnpa1l2-ps2-201ENSMUST00000022493 963 ntBASIC12.42□□□□□ -0.42
Otx1P80205 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.42□□□□□ -0.42
Otx1P80205 Lce1b-201ENSMUST00000029531 647 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Mast3-201ENSMUST00000166004 5305 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Otx1P80205 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Otx1P80205 Gm45630-201ENSMUST00000210243 1911 ntBASIC12.42□□□□□ -0.42
Otx1P80205 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Otx1P80205 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC12.42□□□□□ -0.42
Otx1P80205 Cpeb3-201ENSMUST00000079754 5899 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Eif4g1-206ENSMUST00000115463 5378 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Ece2-201ENSMUST00000003898 3152 ntAPPRIS P3 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 AC167013.2-201ENSMUST00000228520 2684 ntBASIC12.42□□□□□ -0.42
Otx1P80205 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Ythdf3-202ENSMUST00000108346 4929 ntTSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC12.42□□□□□ -0.42
Otx1P80205 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Otx1P80205 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC12.41□□□□□ -0.42
Otx1P80205 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Otx1P80205 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC12.41□□□□□ -0.42
Otx1P80205 Gm42466-201ENSMUST00000202099 1301 ntBASIC12.41□□□□□ -0.42
Otx1P80205 2810474O19Rik-202ENSMUST00000100765 5356 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Zpbp2-201ENSMUST00000017339 1455 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Gm6756-201ENSMUST00000180647 1620 ntBASIC12.41□□□□□ -0.42
Otx1P80205 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Otx1P80205 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Acyp1-203ENSMUST00000117138 735 ntAPPRIS P1 TSL 2 BASIC12.41□□□□□ -0.42
Otx1P80205 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.41□□□□□ -0.42
Otx1P80205 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Gm18889-201ENSMUST00000174284 929 ntBASIC12.41□□□□□ -0.42
Otx1P80205 Gm7063-201ENSMUST00000186840 981 ntBASIC12.41□□□□□ -0.42
Otx1P80205 Thap4-205ENSMUST00000189728 713 ntTSL 2 BASIC12.41□□□□□ -0.42
Otx1P80205 Apbb1-215ENSMUST00000190369 1882 ntTSL 5 BASIC12.41□□□□□ -0.42
Otx1P80205 Gm38225-201ENSMUST00000194001 393 ntBASIC12.41□□□□□ -0.42
Otx1P80205 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.41□□□□□ -0.42
Otx1P80205 Gm29683-202ENSMUST00000208511 720 ntTSL 3 BASIC12.41□□□□□ -0.42
Otx1P80205 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Tns1-222ENSMUST00000212888 5643 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Otx1P80205 Emg1-201ENSMUST00000004379 1034 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Dnaja3-201ENSMUST00000060067 2648 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Gm9789-201ENSMUST00000062524 397 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Otx1P80205 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Prrg3-203ENSMUST00000170096 3408 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Cgnl1-203ENSMUST00000122065 4487 ntAPPRIS P2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Otx1P80205 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Otx1P80205 Tc2n-203ENSMUST00000160830 2005 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Otx1P80205 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Otx1P80205 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Otx1P80205 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Otx1P80205 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Otx1P80205 Gata2-201ENSMUST00000015197 3571 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Otx1P80205 Gm25287-201ENSMUST00000103846 110 ntBASIC12.4□□□□□ -0.42
Otx1P80205 Gm22918-201ENSMUST00000103855 110 ntBASIC12.4□□□□□ -0.42
Otx1P80205 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC12.4□□□□□ -0.42
Otx1P80205 Gm15920-201ENSMUST00000118998 402 ntBASIC12.4□□□□□ -0.42
Otx1P80205 Cdk2ap2-204ENSMUST00000174514 669 ntTSL 2 BASIC12.4□□□□□ -0.42
Otx1P80205 1700025N23Rik-201ENSMUST00000186189 915 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Otx1P80205 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC12.4□□□□□ -0.42
Otx1P80205 Timm13-203ENSMUST00000218481 471 ntTSL 3 BASIC12.4□□□□□ -0.42
Otx1P80205 Gm32351-201ENSMUST00000220503 438 ntTSL 5 BASIC12.4□□□□□ -0.42
Retrieved 100 of 76,532 protein–RNA pairs in 27.7 ms