Protein–RNA interactions for Protein: P79621

Ciita, MHC class II transactivator, mousemouse

Predictions only

Length 1,155 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CiitaP79621 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 4921513I03Rik-201ENSMUST00000056994 1534 ntTSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC15.62■□□□□ 0.09
CiitaP79621 Trp53rkb-203ENSMUST00000151826 4426 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC15.62■□□□□ 0.09
CiitaP79621 Fam84b-201ENSMUST00000100635 5565 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Ppp3cb-201ENSMUST00000022355 3074 ntAPPRIS ALT1 TSL 5 BASIC15.62■□□□□ 0.09
CiitaP79621 Rrp8-201ENSMUST00000033179 3053 ntAPPRIS P3 TSL 1 (best) BASIC15.62■□□□□ 0.09
CiitaP79621 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Fahd1-201ENSMUST00000049642 1407 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CiitaP79621 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC15.61■□□□□ 0.09
CiitaP79621 Socs7-201ENSMUST00000045540 7015 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Trmt1-201ENSMUST00000001974 2567 ntAPPRIS P3 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CiitaP79621 Krt2-201ENSMUST00000023712 2613 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC15.61■□□□□ 0.09
CiitaP79621 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Gm4204-201ENSMUST00000110798 1231 ntBASIC15.61■□□□□ 0.09
CiitaP79621 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Gm15321-201ENSMUST00000121290 288 ntBASIC15.61■□□□□ 0.09
CiitaP79621 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 2410080I02Rik-201ENSMUST00000142712 414 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC15.61■□□□□ 0.09
CiitaP79621 Gm15747-202ENSMUST00000151096 524 ntTSL 3 BASIC15.61■□□□□ 0.09
CiitaP79621 Gm7063-201ENSMUST00000186840 981 ntBASIC15.61■□□□□ 0.09
CiitaP79621 Snapc2-203ENSMUST00000208316 1190 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 AC121804.3-201ENSMUST00000223420 295 ntBASIC15.61■□□□□ 0.09
CiitaP79621 AC238811.1-201ENSMUST00000225302 441 ntBASIC15.61■□□□□ 0.09
CiitaP79621 AC155729.1-201ENSMUST00000227758 544 ntBASIC15.61■□□□□ 0.09
CiitaP79621 2900055J20Rik-201ENSMUST00000096572 723 ntAPPRIS P1 BASIC15.61■□□□□ 0.09
CiitaP79621 Slc33a1-202ENSMUST00000160883 1978 ntAPPRIS P1 TSL 5 BASIC15.61■□□□□ 0.09
CiitaP79621 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC15.61■□□□□ 0.09
CiitaP79621 Zfp316-202ENSMUST00000161448 6891 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Fech-201ENSMUST00000025484 2901 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Gm37728-201ENSMUST00000195025 2292 ntBASIC15.61■□□□□ 0.09
CiitaP79621 Syt7-204ENSMUST00000223586 1344 ntBASIC15.61■□□□□ 0.09
CiitaP79621 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.61■□□□□ 0.09
CiitaP79621 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Gm16425-201ENSMUST00000118143 3130 ntBASIC15.61■□□□□ 0.09
CiitaP79621 Ccdc171-204ENSMUST00000126429 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC15.61■□□□□ 0.09
CiitaP79621 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC15.61■□□□□ 0.09
CiitaP79621 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Igf2-202ENSMUST00000097936 2503 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CiitaP79621 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Gm29340-201ENSMUST00000188763 3854 ntBASIC15.6■□□□□ 0.09
CiitaP79621 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC15.6■□□□□ 0.09
CiitaP79621 Chp2-201ENSMUST00000033152 1456 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Golim4-201ENSMUST00000038563 5546 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Padi4-201ENSMUST00000026381 2316 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Gm9768-201ENSMUST00000206007 2861 ntBASIC15.6■□□□□ 0.09
CiitaP79621 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Gm15957-201ENSMUST00000118893 974 ntBASIC15.6■□□□□ 0.09
CiitaP79621 Xrcc2-204ENSMUST00000134972 464 ntTSL 3 BASIC15.6■□□□□ 0.09
CiitaP79621 Ube2i-208ENSMUST00000173084 1286 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Gm6916-202ENSMUST00000205523 195 ntBASIC15.6■□□□□ 0.09
CiitaP79621 Mesp1-201ENSMUST00000032760 1275 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CiitaP79621 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Gm6263-201ENSMUST00000120029 1342 ntBASIC15.6■□□□□ 0.09
CiitaP79621 Ddi2-201ENSMUST00000102484 9553 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Bag4-201ENSMUST00000038498 4876 ntAPPRIS P1 TSL 1 (best) BASIC15.6■□□□□ 0.09
CiitaP79621 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC15.6■□□□□ 0.09
CiitaP79621 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC15.6■□□□□ 0.09
CiitaP79621 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC15.59■□□□□ 0.09
CiitaP79621 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Kcnc1-201ENSMUST00000025202 7760 ntTSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Lcn5-202ENSMUST00000100312 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 B9d1-201ENSMUST00000102657 817 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC15.59■□□□□ 0.09
CiitaP79621 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CiitaP79621 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Gm24694-201ENSMUST00000180054 110 ntBASIC15.59■□□□□ 0.09
CiitaP79621 Gm27663-201ENSMUST00000184839 110 ntBASIC15.59■□□□□ 0.09
CiitaP79621 Kansl3-206ENSMUST00000187628 336 ntTSL 5 BASIC15.59■□□□□ 0.09
CiitaP79621 Gm29667-201ENSMUST00000190817 490 ntBASIC15.59■□□□□ 0.09
CiitaP79621 AC102291.3-201ENSMUST00000226566 405 ntBASIC15.59■□□□□ 0.09
CiitaP79621 Cela1-201ENSMUST00000023775 1103 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Ramp3-201ENSMUST00000045374 1233 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC15.59■□□□□ 0.09
CiitaP79621 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Ftl1-201ENSMUST00000094434 968 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC15.59■□□□□ 0.09
CiitaP79621 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.59■□□□□ 0.09
CiitaP79621 Gm45667-201ENSMUST00000210380 1316 ntBASIC15.59■□□□□ 0.09
CiitaP79621 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC15.59■□□□□ 0.09
Retrieved 100 of 76,532 protein–RNA pairs in 24.7 ms