Protein–RNA interactions for Protein: P62892

Rpl39, 60S ribosomal protein L39, mousemouse

Predictions only

Length 51 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rpl39P62892 Nup98-206ENSMUST00000211235 3748 ntTSL 5 BASIC10.29□□□□□ -0.76
Rpl39P62892 Cacna1b-205ENSMUST00000114447 6987 ntAPPRIS ALT2 TSL 5 BASIC10.29□□□□□ -0.76
Rpl39P62892 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 4930579G24Rik-201ENSMUST00000029388 1970 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Wbp2-202ENSMUST00000106444 1012 ntTSL 2 BASIC10.29□□□□□ -0.76
Rpl39P62892 Hist1h2bj-201ENSMUST00000110452 463 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rpl39P62892 Hist1h2bp-202ENSMUST00000110473 621 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Trav13-3-201ENSMUST00000117226 336 ntBASIC10.29□□□□□ -0.76
Rpl39P62892 AA414768-201ENSMUST00000121924 1257 ntBASIC10.29□□□□□ -0.76
Rpl39P62892 Tecr-201ENSMUST00000019382 1158 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Gm42456-201ENSMUST00000196840 387 ntTSL 3 BASIC10.29□□□□□ -0.76
Rpl39P62892 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Csrp2-207ENSMUST00000220409 780 ntTSL 2 BASIC10.29□□□□□ -0.76
Rpl39P62892 Hist1h2bm-201ENSMUST00000224651 524 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rpl39P62892 Spcs1-207ENSMUST00000228767 1008 ntBASIC10.29□□□□□ -0.76
Rpl39P62892 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC10.29□□□□□ -0.76
Rpl39P62892 Wfdc6b-201ENSMUST00000094346 984 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Ociad2-201ENSMUST00000087195 2554 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Vldlr-207ENSMUST00000167487 7971 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Hdac7-202ENSMUST00000088402 4223 ntAPPRIS P3 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Slc25a46-201ENSMUST00000060396 4371 ntAPPRIS P1 TSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC10.29□□□□□ -0.76
Rpl39P62892 Pitx2-206ENSMUST00000174623 1493 ntTSL 2 BASIC10.29□□□□□ -0.76
Rpl39P62892 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC10.29□□□□□ -0.76
Rpl39P62892 Kcnj9-202ENSMUST00000194204 2265 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Lime1-201ENSMUST00000048077 1959 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Hdac10-202ENSMUST00000109347 1824 ntTSL 5 BASIC10.28□□□□□ -0.76
Rpl39P62892 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Rpl39P62892 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rpl39P62892 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Spsb1-201ENSMUST00000038562 3092 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Miat-205ENSMUST00000182953 9163 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Rasd2-202ENSMUST00000139848 2810 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Tbkbp1-201ENSMUST00000066078 3338 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rpl39P62892 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Gm11185-201ENSMUST00000117732 1007 ntBASIC10.28□□□□□ -0.76
Rpl39P62892 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Erdr1-203ENSMUST00000179077 887 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rpl39P62892 Hist1h2bc-201ENSMUST00000018246 1156 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Gm20383-201ENSMUST00000203799 1227 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 AC155729.1-201ENSMUST00000227758 544 ntBASIC10.28□□□□□ -0.76
Rpl39P62892 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Insl3-201ENSMUST00000034261 623 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Tctex1d4-201ENSMUST00000062206 990 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Phf24-201ENSMUST00000069184 6392 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Bptf-202ENSMUST00000106762 11847 ntAPPRIS ALT2 TSL 5 BASIC10.28□□□□□ -0.76
Rpl39P62892 Gga3-202ENSMUST00000106508 3582 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Clec16a-205ENSMUST00000115827 2949 ntAPPRIS ALT2 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC10.28□□□□□ -0.76
Rpl39P62892 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC10.28□□□□□ -0.76
Rpl39P62892 Pag1-204ENSMUST00000161949 8256 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Dbndd2-201ENSMUST00000017878 1338 ntAPPRIS P1 TSL 2 BASIC10.28□□□□□ -0.76
Rpl39P62892 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC10.28□□□□□ -0.76
Rpl39P62892 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Gm2420-202ENSMUST00000202224 2249 ntBASIC10.27□□□□□ -0.76
Rpl39P62892 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Hspb6-201ENSMUST00000044048 1363 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Adat1-203ENSMUST00000139820 2762 ntTSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Sfswap-201ENSMUST00000053737 3313 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.76
Rpl39P62892 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.76
Rpl39P62892 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC10.27□□□□□ -0.77
Rpl39P62892 Proser1-201ENSMUST00000058577 4472 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 Pgm5-201ENSMUST00000047666 3239 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Tmem200a-201ENSMUST00000066049 4115 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Syngap1-201ENSMUST00000081285 4315 ntAPPRIS ALT2 TSL 5 BASIC10.27□□□□□ -0.77
Rpl39P62892 Dnase1l1-201ENSMUST00000019232 1625 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Xrra1-201ENSMUST00000036155 2731 ntAPPRIS P2 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Emc7-201ENSMUST00000069747 5826 ntAPPRIS P1 TSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Gm7935-201ENSMUST00000100555 1278 ntBASIC10.27□□□□□ -0.77
Rpl39P62892 Mrpl58-202ENSMUST00000103036 749 ntTSL 1 (best) BASIC10.27□□□□□ -0.77
Rpl39P62892 Rhoc-202ENSMUST00000106787 959 ntAPPRIS P1 TSL 2 BASIC10.27□□□□□ -0.77
Retrieved 100 of 76,532 protein–RNA pairs in 30.1 ms