Protein–RNA interactions for Protein: P62311

Lsm3, U6 snRNA-associated Sm-like protein LSm3, mousemouse

Known RBP Predictions only

Length 102 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lsm3P62311 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 4933426K07Rik-201ENSMUST00000143009 1548 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Psmd14-201ENSMUST00000028278 1541 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Dab2ip-204ENSMUST00000112983 6051 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC13.15□□□□□ -0.3
Lsm3P62311 Dnajc9-201ENSMUST00000022345 1631 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Nrd1-202ENSMUST00000102736 4179 ntAPPRIS ALT2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Ablim1-204ENSMUST00000111524 1251 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Olfr55-201ENSMUST00000112168 948 ntAPPRIS P1 BASIC13.15□□□□□ -0.3
Lsm3P62311 Ciao1-204ENSMUST00000174030 1109 ntTSL 5 BASIC13.15□□□□□ -0.3
Lsm3P62311 Fkbp3-201ENSMUST00000021332 1022 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Mpc2-201ENSMUST00000027853 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Cck-201ENSMUST00000035120 691 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Gm26718-201ENSMUST00000181048 1378 ntTSL 5 BASIC13.15□□□□□ -0.3
Lsm3P62311 Ebf1-202ENSMUST00000101326 3422 ntAPPRIS ALT1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Ptgdr2-201ENSMUST00000037261 2644 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Nphp1-201ENSMUST00000028857 2260 ntAPPRIS P3 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Ankra2-208ENSMUST00000226100 1476 ntBASIC13.15□□□□□ -0.3
Lsm3P62311 Gm7901-201ENSMUST00000120430 1597 ntBASIC13.15□□□□□ -0.3
Lsm3P62311 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC13.15□□□□□ -0.3
Lsm3P62311 Opa3-201ENSMUST00000063976 3366 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Sema4a-214ENSMUST00000166237 3046 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Lsm3P62311 Ppp1r13l-201ENSMUST00000047621 3130 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lsm3P62311 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lsm3P62311 Elk3-201ENSMUST00000008542 4212 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lsm3P62311 Gnaz-202ENSMUST00000159991 3331 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.31
Lsm3P62311 Rnf208-202ENSMUST00000114355 1333 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lsm3P62311 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Gm14451-201ENSMUST00000121581 1542 ntBASIC13.14□□□□□ -0.31
Lsm3P62311 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lsm3P62311 Krt26-201ENSMUST00000100482 2471 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.14□□□□□ -0.31
Lsm3P62311 Trim80-201ENSMUST00000093914 1934 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lsm3P62311 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.14□□□□□ -0.31
Lsm3P62311 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Radil-204ENSMUST00000110785 3708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Smim14-205ENSMUST00000139122 4560 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 1700024G13Rik-201ENSMUST00000100723 850 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Prkcz-203ENSMUST00000105624 694 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC13.14□□□□□ -0.31
Lsm3P62311 Gm12973-201ENSMUST00000143967 607 ntTSL 5 BASIC13.14□□□□□ -0.31
Lsm3P62311 Tnfaip8-208ENSMUST00000148989 1002 ntAPPRIS P1 TSL 2 BASIC13.14□□□□□ -0.31
Lsm3P62311 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Arpc4-204ENSMUST00000204802 794 ntTSL 3 BASIC13.14□□□□□ -0.31
Lsm3P62311 AC122024.2-201ENSMUST00000220086 871 ntBASIC13.14□□□□□ -0.31
Lsm3P62311 Vti1a-206ENSMUST00000225529 1244 ntBASIC13.14□□□□□ -0.31
Lsm3P62311 Arhgef33-211ENSMUST00000225658 473 ntBASIC13.14□□□□□ -0.31
Lsm3P62311 Fam213b-201ENSMUST00000030935 883 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Cltb-201ENSMUST00000049575 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Olfr279-201ENSMUST00000050451 933 ntAPPRIS P1 BASIC13.14□□□□□ -0.31
Lsm3P62311 Evi5l-203ENSMUST00000176149 3938 ntAPPRIS ALT2 TSL 5 BASIC13.14□□□□□ -0.31
Lsm3P62311 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Mir155hg-202ENSMUST00000185662 1362 ntTSL 5 BASIC13.14□□□□□ -0.31
Lsm3P62311 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Dhx58-201ENSMUST00000017974 2412 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC13.14□□□□□ -0.31
Lsm3P62311 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Slitrk3-201ENSMUST00000059407 3587 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.31
Lsm3P62311 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Alox12b-201ENSMUST00000036424 2431 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Celf4-203ENSMUST00000223704 2492 ntAPPRIS ALT1 BASIC13.13□□□□□ -0.31
Lsm3P62311 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Lsm3P62311 Pofut1-203ENSMUST00000099192 1385 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Gm10499-201ENSMUST00000174094 934 ntBASIC13.13□□□□□ -0.31
Lsm3P62311 Rab7-206ENSMUST00000203674 424 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm3P62311 Gm45058-201ENSMUST00000205810 766 ntBASIC13.13□□□□□ -0.31
Lsm3P62311 Lmo1-203ENSMUST00000208136 772 ntTSL 2 BASIC13.13□□□□□ -0.31
Lsm3P62311 Gm9172-201ENSMUST00000212092 954 ntBASIC13.13□□□□□ -0.31
Lsm3P62311 Gm18622-201ENSMUST00000219361 595 ntBASIC13.13□□□□□ -0.31
Lsm3P62311 Prss21-201ENSMUST00000024928 1094 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Cmtm7-201ENSMUST00000035009 993 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 C530025M09Rik-201ENSMUST00000099264 690 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Lsm3P62311 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 AC154747.3-201ENSMUST00000224471 3470 ntBASIC13.13□□□□□ -0.31
Lsm3P62311 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Eva1c-203ENSMUST00000099548 1948 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Arhgef2-201ENSMUST00000029694 4300 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Kcnk13-201ENSMUST00000049788 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 Tmed9-201ENSMUST00000109905 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Lsm3P62311 B3gnt4-201ENSMUST00000031384 1423 ntAPPRIS P1 BASIC13.13□□□□□ -0.31
Lsm3P62311 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC13.13□□□□□ -0.31
Lsm3P62311 Rrp15-201ENSMUST00000001339 1321 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 29.5 ms