Protein–RNA interactions for Protein: P59708

Sf3b6, Splicing factor 3B subunit 6, mousemouse

Known RBP Predictions only

Length 125 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sf3b6P59708 AC161829.1-201ENSMUST00000220298 281 ntBASIC12.8□□□□□ -0.36
Sf3b6P59708 AC147366.1-201ENSMUST00000227671 852 ntBASIC12.8□□□□□ -0.36
Sf3b6P59708 Gsdmcl1-201ENSMUST00000071847 1133 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Sdhc-201ENSMUST00000081560 815 ntTSL 3 BASIC12.8□□□□□ -0.36
Sf3b6P59708 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Cobl-201ENSMUST00000046755 5615 ntAPPRIS P3 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Pccb-201ENSMUST00000035116 2320 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Pja1-202ENSMUST00000113790 2108 ntAPPRIS ALT2 TSL 2 BASIC12.8□□□□□ -0.36
Sf3b6P59708 Mcm6-201ENSMUST00000027601 2910 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Cct4-204ENSMUST00000173867 2484 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Hk2-204ENSMUST00000170833 2792 ntTSL 5 BASIC12.8□□□□□ -0.36
Sf3b6P59708 Fgfr3-210ENSMUST00000169212 4245 ntAPPRIS P4 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 E430024P14Rik-203ENSMUST00000160545 2833 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Sf3b6P59708 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Sem1-201ENSMUST00000041111 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Adgrl1-210ENSMUST00000152978 5734 ntTSL 5 BASIC12.79□□□□□ -0.36
Sf3b6P59708 Rnase10-202ENSMUST00000164632 1521 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 1600002D24Rik-202ENSMUST00000136744 1854 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC12.79□□□□□ -0.36
Sf3b6P59708 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Tmem255b-201ENSMUST00000167071 1138 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm5682-201ENSMUST00000173402 505 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm4691-201ENSMUST00000182339 1000 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm28411-202ENSMUST00000191318 464 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44357-201ENSMUST00000195897 142 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm19658-201ENSMUST00000196231 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44367-201ENSMUST00000196836 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44350-201ENSMUST00000197197 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44390-201ENSMUST00000197533 144 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44313-201ENSMUST00000198018 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44486-201ENSMUST00000198508 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44314-201ENSMUST00000199263 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm2451-201ENSMUST00000199447 999 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44394-201ENSMUST00000199558 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44484-201ENSMUST00000199873 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44466-201ENSMUST00000200264 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm10290-201ENSMUST00000200451 999 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm44359-201ENSMUST00000200671 138 ntBASIC12.79□□□□□ -0.36
Sf3b6P59708 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC12.79□□□□□ -0.36
Sf3b6P59708 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC12.79□□□□□ -0.36
Sf3b6P59708 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC12.79□□□□□ -0.36
Sf3b6P59708 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Mkrn1-201ENSMUST00000031985 3046 ntAPPRIS P3 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Fam122b-203ENSMUST00000114841 3074 ntAPPRIS ALT2 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Esm1-201ENSMUST00000038144 2097 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Gpr146-201ENSMUST00000051293 4157 ntAPPRIS P1 TSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Frmd4b-203ENSMUST00000113355 4913 ntTSL 1 (best) BASIC12.79□□□□□ -0.36
Sf3b6P59708 Gm20708-201ENSMUST00000132298 1780 ntAPPRIS P1 TSL 2 BASIC12.79□□□□□ -0.36
Sf3b6P59708 H2-T23-201ENSMUST00000102678 1472 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Cant1-202ENSMUST00000092378 2995 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.78□□□□□ -0.36
Sf3b6P59708 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Zfp318-204ENSMUST00000138127 3936 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sf3b6P59708 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Samd11-202ENSMUST00000217934 2413 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Krt74-201ENSMUST00000088018 1648 ntAPPRIS P1 TSL 2 BASIC12.78□□□□□ -0.36
Sf3b6P59708 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC12.78□□□□□ -0.36
Sf3b6P59708 Fbxo17-205ENSMUST00000167118 861 ntAPPRIS P1 TSL 5 BASIC12.78□□□□□ -0.36
Sf3b6P59708 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC12.78□□□□□ -0.36
Sf3b6P59708 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sf3b6P59708 Samd13-205ENSMUST00000197989 591 ntTSL 5 BASIC12.78□□□□□ -0.36
Sf3b6P59708 AC133598.3-202ENSMUST00000224219 531 ntBASIC12.78□□□□□ -0.36
Sf3b6P59708 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Slc19a2-202ENSMUST00000159230 3432 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Rnf123-201ENSMUST00000047746 4722 ntAPPRIS ALT2 TSL 5 BASIC12.78□□□□□ -0.36
Sf3b6P59708 Gm6159-201ENSMUST00000191249 1724 ntBASIC12.78□□□□□ -0.36
Sf3b6P59708 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 AU040320-201ENSMUST00000047431 4384 ntAPPRIS ALT2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Papd7-201ENSMUST00000044081 3994 ntAPPRIS P2 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC12.78□□□□□ -0.36
Sf3b6P59708 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC12.78□□□□□ -0.36
Sf3b6P59708 Grk6-205ENSMUST00000224653 2976 ntBASIC12.78□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 79.8 ms