Protein–RNA interactions for Protein: P59240

Nphp4, Nephrocystin-4, mousemouse

Predictions only

Length 1,425 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nphp4P59240 Gm37411-201ENSMUST00000194180 2282 ntBASIC19.36■□□□□ 0.69
Nphp4P59240 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC19.36■□□□□ 0.69
Nphp4P59240 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Grm4-201ENSMUST00000118161 4537 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
Nphp4P59240 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Cenpt-201ENSMUST00000040776 1814 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Tmem229a-201ENSMUST00000127247 5157 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
Nphp4P59240 Gnao1-207ENSMUST00000138659 5526 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
Nphp4P59240 Gm9347-201ENSMUST00000211473 1607 ntBASIC19.35■□□□□ 0.69
Nphp4P59240 Gpsm1-202ENSMUST00000066936 3384 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
Nphp4P59240 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Pisd-ps1-201ENSMUST00000119128 1115 ntBASIC19.35■□□□□ 0.69
Nphp4P59240 Gm12960-201ENSMUST00000120017 1066 ntBASIC19.35■□□□□ 0.69
Nphp4P59240 Gm14224-201ENSMUST00000147187 864 ntTSL 3 BASIC19.35■□□□□ 0.69
Nphp4P59240 Gm43094-201ENSMUST00000196549 921 ntBASIC19.35■□□□□ 0.69
Nphp4P59240 Gm18307-201ENSMUST00000206864 949 ntBASIC19.35■□□□□ 0.69
Nphp4P59240 Slc22a18-201ENSMUST00000052348 1525 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nphp4P59240 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Zbtb20-202ENSMUST00000114690 2759 ntAPPRIS ALT1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Smad1-203ENSMUST00000109885 3775 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Eda-202ENSMUST00000113775 5088 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Gm37305-201ENSMUST00000195714 4279 ntBASIC19.35■□□□□ 0.69
Nphp4P59240 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Isg20l2-201ENSMUST00000055984 2893 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
Nphp4P59240 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Eri1-201ENSMUST00000033927 5079 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
Nphp4P59240 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC19.34■□□□□ 0.69
Nphp4P59240 Gm13066-201ENSMUST00000145263 884 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Gm37748-201ENSMUST00000194379 1140 ntBASIC19.34■□□□□ 0.69
Nphp4P59240 Gm43433-201ENSMUST00000196573 481 ntBASIC19.34■□□□□ 0.69
Nphp4P59240 Tnfrsf19-205ENSMUST00000225730 744 ntAPPRIS ALT2 BASIC19.34■□□□□ 0.69
Nphp4P59240 Wdr83-201ENSMUST00000093357 1238 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Ppp1r12b-202ENSMUST00000086444 3137 ntAPPRIS P2 TSL 5 BASIC19.34■□□□□ 0.69
Nphp4P59240 Gm17108-201ENSMUST00000168625 2877 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Slk-202ENSMUST00000051691 4239 ntAPPRIS P3 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC19.34■□□□□ 0.69
Nphp4P59240 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Gpr37l1-201ENSMUST00000027682 2269 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
Nphp4P59240 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC19.34■□□□□ 0.69
Nphp4P59240 Gm9002-201ENSMUST00000178437 499 ntBASIC19.34■□□□□ 0.69
Nphp4P59240 Pbx2-205ENSMUST00000183827 1186 ntTSL 5 BASIC19.34■□□□□ 0.69
Nphp4P59240 Cdk7-205ENSMUST00000225990 1159 ntBASIC19.34■□□□□ 0.69
Nphp4P59240 Fyn-201ENSMUST00000063091 3562 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nphp4P59240 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nphp4P59240 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nphp4P59240 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC19.33■□□□□ 0.69
Nphp4P59240 Atat1-201ENSMUST00000056034 1930 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nphp4P59240 Trappc12-203ENSMUST00000170994 2818 ntTSL 1 (best) BASIC19.33■□□□□ 0.69
Nphp4P59240 Tcf3-209ENSMUST00000105345 2950 ntAPPRIS P3 TSL 1 (best) BASIC19.33■□□□□ 0.69
Nphp4P59240 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC19.33■□□□□ 0.68
Nphp4P59240 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nphp4P59240 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nphp4P59240 Fmnl3-203ENSMUST00000120633 4290 ntAPPRIS ALT2 TSL 5 BASIC19.33■□□□□ 0.68
Nphp4P59240 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nphp4P59240 Gm27772-201ENSMUST00000184900 187 ntBASIC19.33■□□□□ 0.68
Nphp4P59240 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC19.33■□□□□ 0.68
Nphp4P59240 Srgn-201ENSMUST00000020271 938 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nphp4P59240 Gm7446-201ENSMUST00000221035 1240 ntBASIC19.33■□□□□ 0.68
Nphp4P59240 Pdzd11-202ENSMUST00000059099 1041 ntAPPRIS P1 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nphp4P59240 Sbf1-205ENSMUST00000144585 6165 ntAPPRIS ALT2 TSL 1 (best) BASIC19.33■□□□□ 0.68
Nphp4P59240 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Fmr1-205ENSMUST00000114656 4257 ntTSL 5 BASIC19.32■□□□□ 0.68
Nphp4P59240 Tmtc1-202ENSMUST00000100772 8269 ntTSL 2 BASIC19.32■□□□□ 0.68
Nphp4P59240 Gm2762-202ENSMUST00000201517 2339 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC19.32■□□□□ 0.68
Nphp4P59240 Zc3hc1-210ENSMUST00000152391 1673 ntTSL 5 BASIC19.32■□□□□ 0.68
Nphp4P59240 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Fbxo42-201ENSMUST00000030757 5934 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC19.32■□□□□ 0.68
Nphp4P59240 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Rbfox3-203ENSMUST00000103023 2809 ntAPPRIS ALT2 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC19.32■□□□□ 0.68
Nphp4P59240 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC19.32■□□□□ 0.68
Nphp4P59240 Gm10142-201ENSMUST00000179767 363 ntAPPRIS P1 BASIC19.32■□□□□ 0.68
Nphp4P59240 Gm8602-201ENSMUST00000184045 607 ntBASIC19.32■□□□□ 0.68
Nphp4P59240 Selenoh-205ENSMUST00000189636 499 ntAPPRIS ALT2 TSL 3 BASIC19.32■□□□□ 0.68
Nphp4P59240 Gm29741-201ENSMUST00000192667 421 ntBASIC19.32■□□□□ 0.68
Retrieved 100 of 76,532 protein–RNA pairs in 33.6 ms