Protein–RNA interactions for Protein: P57080

Usp25, Ubiquitin carboxyl-terminal hydrolase 25, mousemouse

Predictions only

Length 1,055 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp25P57080 Gm6376-201ENSMUST00000209407 580 ntBASIC16.33■□□□□ 0.2
Usp25P57080 AC154757.1-201ENSMUST00000228289 336 ntBASIC16.33■□□□□ 0.2
Usp25P57080 Gnptg-201ENSMUST00000038973 1234 ntAPPRIS P2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Rph3al-202ENSMUST00000066504 988 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Gm45188-201ENSMUST00000207592 1369 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Krt42-201ENSMUST00000017270 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Gm16685-201ENSMUST00000181286 1592 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Tcf4-253ENSMUST00000202610 1959 ntTSL 5 BASIC16.33■□□□□ 0.2
Usp25P57080 Plxdc1-203ENSMUST00000107565 2439 ntTSL 1 (best) BASIC16.33■□□□□ 0.2
Usp25P57080 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC16.32■□□□□ 0.2
Usp25P57080 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Myh14-202ENSMUST00000107899 6390 ntAPPRIS P3 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Gm14042-201ENSMUST00000120139 833 ntBASIC16.32■□□□□ 0.2
Usp25P57080 Slbp-205ENSMUST00000139518 1191 ntAPPRIS ALT2 TSL 2 BASIC16.32■□□□□ 0.2
Usp25P57080 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Slc19a2-204ENSMUST00000169394 894 ntTSL 5 BASIC16.32■□□□□ 0.2
Usp25P57080 Gm18856-201ENSMUST00000178096 1374 ntBASIC16.32■□□□□ 0.2
Usp25P57080 Gm38102-201ENSMUST00000192791 1935 ntBASIC16.32■□□□□ 0.2
Usp25P57080 Gm6089-201ENSMUST00000197666 938 ntBASIC16.32■□□□□ 0.2
Usp25P57080 9230114J08Rik-201ENSMUST00000200375 350 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Gm18246-201ENSMUST00000221023 728 ntBASIC16.32■□□□□ 0.2
Usp25P57080 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Olah-201ENSMUST00000027955 1533 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Ercc1-201ENSMUST00000003645 1375 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Slfn2-201ENSMUST00000038038 1664 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Gtpbp1-201ENSMUST00000046463 3398 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Zbtb17-201ENSMUST00000006377 2722 ntAPPRIS P1 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.32■□□□□ 0.2
Usp25P57080 Zfp467-203ENSMUST00000114558 3115 ntTSL 1 (best) BASIC16.32■□□□□ 0.2
Usp25P57080 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Gpx3-201ENSMUST00000082430 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Gm17619-201ENSMUST00000180625 1449 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC16.31■□□□□ 0.2
Usp25P57080 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Prkx-202ENSMUST00000114044 2639 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Mansc4-201ENSMUST00000100780 1125 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 1700020A23Rik-202ENSMUST00000110281 521 ntAPPRIS P1 TSL 3 BASIC16.31■□□□□ 0.2
Usp25P57080 Kxd1-202ENSMUST00000117580 696 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp25P57080 Gm17112-201ENSMUST00000163194 432 ntTSL 3 BASIC16.31■□□□□ 0.2
Usp25P57080 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Usp25P57080 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp25P57080 Rps4l-201ENSMUST00000071745 943 ntBASIC16.31■□□□□ 0.2
Usp25P57080 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Rest-202ENSMUST00000113449 6924 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Kif9-204ENSMUST00000198043 2233 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC16.31■□□□□ 0.2
Usp25P57080 Ddx42-201ENSMUST00000021046 4011 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Lhx1-201ENSMUST00000018842 3846 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.31■□□□□ 0.2
Usp25P57080 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC16.31■□□□□ 0.2
Usp25P57080 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Gm11405-201ENSMUST00000118689 1556 ntBASIC16.3■□□□□ 0.2
Usp25P57080 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Pam-202ENSMUST00000097625 4102 ntAPPRIS P2 TSL 5 BASIC16.3■□□□□ 0.2
Usp25P57080 Gm45779-201ENSMUST00000212189 4064 ntBASIC16.3■□□□□ 0.2
Usp25P57080 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Rac3-201ENSMUST00000018156 1076 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Gm4691-201ENSMUST00000182339 1000 ntBASIC16.3■□□□□ 0.2
Usp25P57080 Gm2451-201ENSMUST00000199447 999 ntBASIC16.3■□□□□ 0.2
Usp25P57080 Gm10290-201ENSMUST00000200451 999 ntBASIC16.3■□□□□ 0.2
Usp25P57080 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Apopt1-201ENSMUST00000040519 1065 ntAPPRIS P3 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Etfdh-201ENSMUST00000029386 2377 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Usp25P57080 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC16.3■□□□□ 0.2
Retrieved 100 of 76,532 protein–RNA pairs in 32.3 ms