Protein–RNA interactions for Protein: P56873

Sssca1, Sjoegren syndrome/scleroderma autoantigen 1 homolog, mousemouse

Predictions only

Length 199 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sssca1P56873 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Slc25a34-201ENSMUST00000038661 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Pdgfc-201ENSMUST00000029652 3521 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Pax2-201ENSMUST00000004340 3095 ntTSL 5 BASIC11.67□□□□□ -0.54
Sssca1P56873 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Gnas-204ENSMUST00000087877 3947 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Dcaf17-202ENSMUST00000102701 1703 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Wnt3a-201ENSMUST00000010044 2761 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Gm11764-201ENSMUST00000120221 623 ntBASIC11.67□□□□□ -0.54
Sssca1P56873 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Sap25-206ENSMUST00000177466 1005 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sssca1P56873 Gm29629-201ENSMUST00000187926 386 ntTSL 3 BASIC11.67□□□□□ -0.54
Sssca1P56873 4930442P19Rik-201ENSMUST00000193163 1240 ntBASIC11.67□□□□□ -0.54
Sssca1P56873 Gm15406-202ENSMUST00000202229 767 ntTSL 2 BASIC11.67□□□□□ -0.54
Sssca1P56873 Gm42477-201ENSMUST00000202427 469 ntTSL 3 BASIC11.67□□□□□ -0.54
Sssca1P56873 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC11.67□□□□□ -0.54
Sssca1P56873 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Scamp5-203ENSMUST00000214256 1025 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 AC147366.1-201ENSMUST00000227671 852 ntBASIC11.67□□□□□ -0.54
Sssca1P56873 Apoa1-201ENSMUST00000034588 1035 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Grb10-201ENSMUST00000093321 5061 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Radil-201ENSMUST00000063635 3700 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC11.67□□□□□ -0.54
Sssca1P56873 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Sssca1P56873 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC11.67□□□□□ -0.54
Sssca1P56873 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC11.67□□□□□ -0.54
Sssca1P56873 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Tcf12-201ENSMUST00000034755 4621 ntAPPRIS ALT1 TSL 5 BASIC11.67□□□□□ -0.54
Sssca1P56873 Zfp784-201ENSMUST00000062428 2153 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Ptpn2-201ENSMUST00000025420 1568 ntAPPRIS P3 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Pqbp1-202ENSMUST00000115654 1374 ntAPPRIS P1 TSL 1 (best) BASIC11.67□□□□□ -0.54
Sssca1P56873 Best4-ps-201ENSMUST00000129783 1380 ntBASIC11.67□□□□□ -0.54
Sssca1P56873 Gm18856-201ENSMUST00000178096 1374 ntBASIC11.67□□□□□ -0.54
Sssca1P56873 Skida1-201ENSMUST00000066885 2936 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Heg1-201ENSMUST00000126532 6714 ntAPPRIS P5 TSL 5 BASIC11.66□□□□□ -0.54
Sssca1P56873 Hnrnpa3-202ENSMUST00000111961 1734 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sssca1P56873 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC11.66□□□□□ -0.54
Sssca1P56873 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Sssca1P56873 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.66□□□□□ -0.54
Sssca1P56873 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.66□□□□□ -0.54
Sssca1P56873 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Fmn2-201ENSMUST00000030039 6442 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC11.66□□□□□ -0.54
Sssca1P56873 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC11.66□□□□□ -0.54
Sssca1P56873 Oraov1-203ENSMUST00000105895 1016 ntAPPRIS ALT2 TSL 2 BASIC11.66□□□□□ -0.54
Sssca1P56873 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sssca1P56873 Gm8749-201ENSMUST00000117737 331 ntBASIC11.66□□□□□ -0.54
Sssca1P56873 Washc3-202ENSMUST00000171151 837 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 0610025J13Rik-203ENSMUST00000180374 713 ntTSL 5 BASIC11.66□□□□□ -0.54
Sssca1P56873 Mthfsl-204ENSMUST00000186863 725 ntTSL 2 BASIC11.66□□□□□ -0.54
Sssca1P56873 4930500L23Rik-201ENSMUST00000198000 747 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Aga-203ENSMUST00000211424 1147 ntAPPRIS ALT2 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Cdpf1-201ENSMUST00000071876 997 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC11.66□□□□□ -0.54
Sssca1P56873 Specc1-209ENSMUST00000201671 2523 ntTSL 5 BASIC11.66□□□□□ -0.54
Sssca1P56873 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Adra1b-204ENSMUST00000167574 3047 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Zbtb5-202ENSMUST00000107817 3867 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Kcnj8-201ENSMUST00000032374 2269 ntTSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC11.66□□□□□ -0.54
Sssca1P56873 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.66□□□□□ -0.54
Sssca1P56873 Srgn-204ENSMUST00000160987 1727 ntAPPRIS P1 TSL 3 BASIC11.66□□□□□ -0.54
Sssca1P56873 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Vasp-201ENSMUST00000032561 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.66□□□□□ -0.54
Sssca1P56873 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sssca1P56873 Hdac5-203ENSMUST00000107151 4852 ntTSL 5 BASIC11.65□□□□□ -0.54
Sssca1P56873 Tspyl5-201ENSMUST00000042021 4010 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sssca1P56873 Dpp3-201ENSMUST00000025851 2683 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sssca1P56873 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sssca1P56873 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sssca1P56873 Prrt3-201ENSMUST00000101059 3304 ntAPPRIS P3 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sssca1P56873 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.65□□□□□ -0.54
Sssca1P56873 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC11.65□□□□□ -0.54
Sssca1P56873 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Sssca1P56873 1500011B03Rik-202ENSMUST00000112160 1333 ntAPPRIS ALT2 TSL 1 (best) BASIC11.65□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 40.8 ms