Protein–RNA interactions for Protein: P53783

Sox1, Transcription factor SOX-1, mousemouse

Predictions only

Length 391 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sox1P53783 Gm9368-201ENSMUST00000219348 831 ntBASIC14.66□□□□□ -0.06
Sox1P53783 Rgl1-202ENSMUST00000111857 3037 ntTSL 5 BASIC14.66□□□□□ -0.06
Sox1P53783 Degs1-201ENSMUST00000035295 2048 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Pde8b-214ENSMUST00000172104 2493 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Sox1P53783 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Sox1P53783 Tcf3-202ENSMUST00000020379 2829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Igdcc4-202ENSMUST00000077696 6361 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox1P53783 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox1P53783 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Chrd-202ENSMUST00000115423 2417 ntTSL 2 BASIC14.65□□□□□ -0.06
Sox1P53783 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Cant1-204ENSMUST00000106288 2873 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sox1P53783 Mfsd4b5-205ENSMUST00000170579 1554 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Sox1P53783 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Jade1-203ENSMUST00000168086 4790 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Ranbp9-201ENSMUST00000144326 3371 ntAPPRIS P2 TSL 5 BASIC14.65□□□□□ -0.06
Sox1P53783 Gm22323-201ENSMUST00000103832 109 ntBASIC14.65□□□□□ -0.06
Sox1P53783 Gm13612-201ENSMUST00000119276 390 ntBASIC14.65□□□□□ -0.06
Sox1P53783 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 A930009A15Rik-201ENSMUST00000173620 1001 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Gm4691-201ENSMUST00000182339 1000 ntBASIC14.65□□□□□ -0.06
Sox1P53783 Gm6944-201ENSMUST00000182449 1006 ntBASIC14.65□□□□□ -0.06
Sox1P53783 Gm11523-203ENSMUST00000184482 802 ntTSL 3 BASIC14.65□□□□□ -0.06
Sox1P53783 Neurl3-202ENSMUST00000188666 1206 ntTSL 5 BASIC14.65□□□□□ -0.06
Sox1P53783 Gm37986-201ENSMUST00000193285 383 ntBASIC14.65□□□□□ -0.06
Sox1P53783 Gm2451-201ENSMUST00000199447 999 ntBASIC14.65□□□□□ -0.06
Sox1P53783 Gm10290-201ENSMUST00000200451 999 ntBASIC14.65□□□□□ -0.06
Sox1P53783 Gm18935-201ENSMUST00000212692 664 ntBASIC14.65□□□□□ -0.06
Sox1P53783 Tnfrsf4-201ENSMUST00000030952 1030 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox1P53783 Mydgf-201ENSMUST00000019723 1710 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Lrrtm1-203ENSMUST00000161677 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Elavl3-201ENSMUST00000003501 5014 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Mta1-203ENSMUST00000109723 2790 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Sox1P53783 Mta1-204ENSMUST00000109726 2775 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Mta1-205ENSMUST00000109727 2789 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Inpp5e-202ENSMUST00000114090 2790 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Sox1P53783 Gm44207-201ENSMUST00000204568 1424 ntBASIC14.65□□□□□ -0.06
Sox1P53783 Sbk2-202ENSMUST00000182214 2236 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sox1P53783 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Sox1P53783 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox1P53783 Trim39-203ENSMUST00000113706 3204 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox1P53783 Klhdc4-201ENSMUST00000045884 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Unc5a-201ENSMUST00000026994 3995 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Dtx2-202ENSMUST00000111142 2650 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Tal1-201ENSMUST00000030489 4213 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Akt2-202ENSMUST00000085917 1392 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox1P53783 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Gm13327-201ENSMUST00000133391 2741 ntTSL 5 BASIC14.64□□□□□ -0.07
Sox1P53783 Wsb2-ps-201ENSMUST00000117937 1217 ntBASIC14.64□□□□□ -0.07
Sox1P53783 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Gm17376-201ENSMUST00000166016 84 ntBASIC14.64□□□□□ -0.07
Sox1P53783 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC14.64□□□□□ -0.07
Sox1P53783 Ddit3-201ENSMUST00000026475 890 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Mlec-201ENSMUST00000112121 5955 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Col4a3bp-203ENSMUST00000179226 3040 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Cndp2-202ENSMUST00000168419 2088 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Ephx3-202ENSMUST00000162117 1590 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Sox1P53783 Ppm1d-201ENSMUST00000020835 2899 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Pank3-201ENSMUST00000018990 7376 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Wnk2-207ENSMUST00000159559 6584 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sox1P53783 Letm2-208ENSMUST00000210616 2974 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Zfp384-208ENSMUST00000112428 3132 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 BC037032-204ENSMUST00000155191 3291 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox1P53783 Dsn1-201ENSMUST00000103129 2080 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Spatc1l-202ENSMUST00000105414 1060 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Gm13464-201ENSMUST00000119418 935 ntBASIC14.63□□□□□ -0.07
Sox1P53783 C430049B03Rik-201ENSMUST00000129764 868 ntTSL 3 BASIC14.63□□□□□ -0.07
Sox1P53783 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Sox1P53783 Gm22334-201ENSMUST00000158070 133 ntBASIC14.63□□□□□ -0.07
Sox1P53783 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Sox1P53783 1700065I16Rik-202ENSMUST00000185477 813 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC14.63□□□□□ -0.07
Sox1P53783 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sox1P53783 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox1P53783 Tssc1-207ENSMUST00000222407 489 ntTSL 3 BASIC14.63□□□□□ -0.07
Sox1P53783 AC192088.1-201ENSMUST00000227561 301 ntBASIC14.63□□□□□ -0.07
Sox1P53783 Psma7-201ENSMUST00000029082 914 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Bpifb3-201ENSMUST00000088950 1821 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Wnt2b-201ENSMUST00000029429 3318 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Tmem28-201ENSMUST00000096363 3909 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Sox1P53783 Sf1-203ENSMUST00000113488 2282 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox1P53783 Gm9333-201ENSMUST00000205452 1323 ntBASIC14.63□□□□□ -0.07
Sox1P53783 Fscn1-207ENSMUST00000198017 2157 ntTSL 5 BASIC14.63□□□□□ -0.07
Sox1P53783 Tbrg4-212ENSMUST00000189268 2347 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Cygb-201ENSMUST00000021166 2331 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Bnip2-201ENSMUST00000034754 2464 ntAPPRIS P4 TSL 1 (best) BASIC14.63□□□□□ -0.07
Sox1P53783 Plaa-201ENSMUST00000107107 2784 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 61 ms