Protein–RNA interactions for Protein: P52946

Pdx1, Pancreas/duodenum homeobox protein 1, mousemouse

Predictions only

Length 284 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pdx1P52946 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdx1P52946 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.12
Pdx1P52946 Gm22065-201ENSMUST00000103753 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm22066-201ENSMUST00000103761 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm24932-201ENSMUST00000103763 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm24115-201ENSMUST00000103799 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm22190-201ENSMUST00000103827 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm22191-201ENSMUST00000103831 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm24721-201ENSMUST00000103849 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm28018-201ENSMUST00000103869 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm26399-201ENSMUST00000103937 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.27□□□□□ -0.13
Pdx1P52946 Gm25349-201ENSMUST00000177728 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm23616-201ENSMUST00000177797 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm25871-201ENSMUST00000177816 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm24752-201ENSMUST00000178240 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm24496-201ENSMUST00000178287 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Faap20-210ENSMUST00000178473 1076 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Gm25649-201ENSMUST00000178476 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm25548-201ENSMUST00000178681 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm23147-201ENSMUST00000178841 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm26095-201ENSMUST00000179270 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm22171-201ENSMUST00000179283 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm23936-201ENSMUST00000179354 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm22619-201ENSMUST00000179516 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm25255-201ENSMUST00000179579 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm24755-201ENSMUST00000179691 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm26506-201ENSMUST00000179692 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm25086-201ENSMUST00000179931 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm23243-201ENSMUST00000180047 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm24659-201ENSMUST00000180212 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm24169-201ENSMUST00000180244 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm23689-201ENSMUST00000180354 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm27359-201ENSMUST00000184153 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm27785-201ENSMUST00000184268 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm27466-201ENSMUST00000184396 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm27703-201ENSMUST00000184836 110 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm5312-201ENSMUST00000203728 547 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 AC155729.1-201ENSMUST00000227758 544 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Gm5867-201ENSMUST00000063197 592 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.27□□□□□ -0.13
Pdx1P52946 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Arl5b-202ENSMUST00000069870 6981 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Ambra1-205ENSMUST00000111317 4929 ntTSL 5 BASIC14.27□□□□□ -0.13
Pdx1P52946 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Tomm34-202ENSMUST00000109384 1923 ntAPPRIS ALT1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Gm44981-201ENSMUST00000205549 1943 ntBASIC14.27□□□□□ -0.13
Pdx1P52946 Rapgef6-205ENSMUST00000108895 1829 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Nupr1l-201ENSMUST00000178355 1827 ntAPPRIS P1 BASIC14.27□□□□□ -0.13
Pdx1P52946 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Slc25a19-212ENSMUST00000178003 2614 ntAPPRIS P1 TSL 5 BASIC14.27□□□□□ -0.13
Pdx1P52946 Tgfbr3-201ENSMUST00000031224 6087 ntAPPRIS P1 TSL 1 (best) BASIC14.27□□□□□ -0.13
Pdx1P52946 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC14.26□□□□□ -0.13
Pdx1P52946 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Lipo3-201ENSMUST00000025694 2768 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Rhbdl1-202ENSMUST00000183929 1349 ntTSL 5 BASIC14.26□□□□□ -0.13
Pdx1P52946 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Tnfrsf13b-202ENSMUST00000101103 750 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.26□□□□□ -0.13
Pdx1P52946 Runx2os2-201ENSMUST00000161664 818 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Gm29541-201ENSMUST00000191351 678 ntBASIC14.26□□□□□ -0.13
Pdx1P52946 Orc6-201ENSMUST00000034132 1287 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Gm8396-201ENSMUST00000057361 823 ntBASIC14.26□□□□□ -0.13
Pdx1P52946 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Lmf1-202ENSMUST00000116641 1858 ntAPPRIS P2 TSL 5 BASIC14.26□□□□□ -0.13
Pdx1P52946 Lmf1-201ENSMUST00000063344 1861 ntAPPRIS ALT2 TSL 5 BASIC14.26□□□□□ -0.13
Pdx1P52946 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Kcng1-201ENSMUST00000099069 2316 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC14.26□□□□□ -0.13
Pdx1P52946 Olfr1372-ps1-202ENSMUST00000203403 9812 ntTSL 5 BASIC14.26□□□□□ -0.13
Pdx1P52946 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Gm10457-201ENSMUST00000222619 1906 ntTSL 2 BASIC14.25□□□□□ -0.13
Pdx1P52946 Map4k5-202ENSMUST00000110567 4250 ntTSL 5 BASIC14.25□□□□□ -0.13
Pdx1P52946 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 AC148324.1-201ENSMUST00000219034 4240 ntBASIC14.25□□□□□ -0.13
Pdx1P52946 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC14.25□□□□□ -0.13
Pdx1P52946 4933434E20Rik-204ENSMUST00000159064 1344 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Abhd11-202ENSMUST00000111216 972 ntTSL 3 BASIC14.25□□□□□ -0.13
Pdx1P52946 Wdr38-202ENSMUST00000112872 1194 ntAPPRIS P1 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Gm14701-201ENSMUST00000117156 348 ntBASIC14.25□□□□□ -0.13
Pdx1P52946 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.25□□□□□ -0.13
Pdx1P52946 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC14.25□□□□□ -0.13
Pdx1P52946 Gm17455-201ENSMUST00000164428 855 ntAPPRIS P1 TSL 3 BASIC14.25□□□□□ -0.13
Retrieved 100 of 76,532 protein–RNA pairs in 35.8 ms