Protein–RNA interactions for Protein: P52019

Sqle, Squalene monooxygenase, mousemouse

Predictions only

Length 572 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SqleP52019 Ret-202ENSMUST00000088790 4497 ntAPPRIS ALT2 TSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Mob4-202ENSMUST00000159311 1816 ntTSL 3 BASIC15.56■□□□□ 0.08
SqleP52019 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Gm42473-201ENSMUST00000201056 2291 ntBASIC15.56■□□□□ 0.08
SqleP52019 Adcy5-201ENSMUST00000114913 7007 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Zfp219-212ENSMUST00000228580 2812 ntAPPRIS ALT2 BASIC15.56■□□□□ 0.08
SqleP52019 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Mapk14-204ENSMUST00000114754 3592 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC15.56■□□□□ 0.08
SqleP52019 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Eda-205ENSMUST00000113778 4942 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Eda-207ENSMUST00000113780 4915 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Eda-208ENSMUST00000113781 4915 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Nefh-201ENSMUST00000093369 3994 ntAPPRIS P1 TSL 2 BASIC15.55■□□□□ 0.08
SqleP52019 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC15.55■□□□□ 0.08
SqleP52019 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Yipf5-201ENSMUST00000025364 2329 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Taz-201ENSMUST00000069722 1851 ntAPPRIS P3 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Tssk4-202ENSMUST00000164809 1686 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Orc6-202ENSMUST00000170141 1466 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Yif1a-201ENSMUST00000025811 1493 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Gm12846-201ENSMUST00000120431 1373 ntBASIC15.55■□□□□ 0.08
SqleP52019 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Gm10327-201ENSMUST00000105222 1002 ntBASIC15.55■□□□□ 0.08
SqleP52019 Isg20-202ENSMUST00000118867 697 ntAPPRIS P1 TSL 3 BASIC15.55■□□□□ 0.08
SqleP52019 Sbk3-201ENSMUST00000133272 1086 ntAPPRIS ALT2 TSL 5 BASIC15.55■□□□□ 0.08
SqleP52019 Ube2i-205ENSMUST00000172587 508 ntTSL 2 BASIC15.55■□□□□ 0.08
SqleP52019 Gm29199-201ENSMUST00000187766 775 ntBASIC15.55■□□□□ 0.08
SqleP52019 Rnf103-202ENSMUST00000114178 3431 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Ext2-201ENSMUST00000028623 2871 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Ofd1-201ENSMUST00000049501 4453 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.55■□□□□ 0.08
SqleP52019 Pax8-201ENSMUST00000028355 2560 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Ccdc43-201ENSMUST00000092569 2366 ntAPPRIS P2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Cadps2-202ENSMUST00000069074 3935 ntTSL 5 BASIC15.55■□□□□ 0.08
SqleP52019 Alox12-202ENSMUST00000108574 2314 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Mapk8ip3-208ENSMUST00000121787 5431 ntAPPRIS ALT2 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Gm15559-201ENSMUST00000132267 2260 ntTSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Nsg2-201ENSMUST00000020537 2239 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Hoxb1-201ENSMUST00000019117 2086 ntAPPRIS P1 TSL 1 (best) BASIC15.55■□□□□ 0.08
SqleP52019 Papolb-201ENSMUST00000099400 4239 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SqleP52019 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 AI606473-201ENSMUST00000177201 1731 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SqleP52019 Gm26878-201ENSMUST00000181778 1644 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Rgl3-201ENSMUST00000045726 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Pde4d-207ENSMUST00000120664 4207 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Wdr12-202ENSMUST00000117438 3251 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Ttll5-201ENSMUST00000040179 5081 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Zfp868-202ENSMUST00000121886 2259 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Ckap4-201ENSMUST00000053871 3089 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Gabrb3-201ENSMUST00000039697 5579 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Cd99l2-204ENSMUST00000114587 973 ntAPPRIS ALT2 TSL 3 BASIC15.54■□□□□ 0.08
SqleP52019 Gm13612-201ENSMUST00000119276 390 ntBASIC15.54■□□□□ 0.08
SqleP52019 Gm12416-201ENSMUST00000120911 1008 ntBASIC15.54■□□□□ 0.08
SqleP52019 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC15.54■□□□□ 0.08
SqleP52019 Gm11791-201ENSMUST00000139327 336 ntTSL 3 BASIC15.54■□□□□ 0.08
SqleP52019 C030047K22Rik-201ENSMUST00000150382 1164 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Gm19184-201ENSMUST00000196798 928 ntBASIC15.54■□□□□ 0.08
SqleP52019 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC15.54■□□□□ 0.08
SqleP52019 Gm7783-201ENSMUST00000204795 781 ntBASIC15.54■□□□□ 0.08
SqleP52019 Gstt2-203ENSMUST00000218500 794 ntTSL 5 BASIC15.54■□□□□ 0.08
SqleP52019 Tomm7-201ENSMUST00000030851 1125 ntAPPRIS P1 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Hnrnph1-202ENSMUST00000077817 2126 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Gm24526-201ENSMUST00000082921 158 ntBASIC15.54■□□□□ 0.08
SqleP52019 Slc30a2-201ENSMUST00000081094 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Sipa1l1-202ENSMUST00000166429 8215 ntAPPRIS P3 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SqleP52019 Usp27x-201ENSMUST00000115744 3240 ntAPPRIS P1 BASIC15.54■□□□□ 0.08
SqleP52019 Msl1-201ENSMUST00000037915 4593 ntAPPRIS P2 TSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Hnrnpll-201ENSMUST00000061331 3116 ntAPPRIS P1 TSL 5 BASIC15.54■□□□□ 0.08
SqleP52019 Gm15816-201ENSMUST00000141930 1688 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC15.54■□□□□ 0.08
SqleP52019 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Pqlc1-205ENSMUST00000131780 2080 ntAPPRIS P3 TSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Bend4-201ENSMUST00000169190 7935 ntAPPRIS P1 TSL 5 BASIC15.53■□□□□ 0.08
SqleP52019 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Bloc1s3-201ENSMUST00000077408 3188 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Ptpa-201ENSMUST00000042055 2586 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Pald1-201ENSMUST00000020289 4282 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Rffl-202ENSMUST00000071152 3633 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Kctd15-203ENSMUST00000108070 2409 ntAPPRIS P1 TSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Rnf170-209ENSMUST00000209300 1881 ntTSL 1 (best) BASIC15.53■□□□□ 0.08
SqleP52019 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.53■□□□□ 0.08
SqleP52019 Mir8109-201ENSMUST00000184375 117 ntBASIC15.53■□□□□ 0.08
SqleP52019 Ssr2-202ENSMUST00000192495 620 ntTSL 5 BASIC15.53■□□□□ 0.08
Retrieved 100 of 76,532 protein–RNA pairs in 49.7 ms