Protein–RNA interactions for Protein: P50220

Nkx2-1, Homeobox protein Nkx-2.1, mousemouse

Predictions only

Length 372 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-1P50220 Psmg4-201ENSMUST00000124996 474 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Mpv17l-205ENSMUST00000143697 580 ntTSL 2 BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Gm14964-202ENSMUST00000149574 716 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Slc25a5-201ENSMUST00000016463 1240 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Ank2-226ENSMUST00000189368 339 ntBASIC11.97□□□□□ -0.49
Nkx2-1P50220 AC153556.1-201ENSMUST00000215135 794 ntTSL 5 BASIC11.97□□□□□ -0.49
Nkx2-1P50220 AC164567.1-201ENSMUST00000219185 960 ntBASIC11.97□□□□□ -0.49
Nkx2-1P50220 Rhoc-201ENSMUST00000002303 1202 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Evx1os-201ENSMUST00000125305 2916 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Myh3-203ENSMUST00000165221 5994 ntAPPRIS P1 TSL 5 BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Mllt11-201ENSMUST00000065482 1923 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Dlx4os-201ENSMUST00000156477 1664 ntTSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC11.97□□□□□ -0.49
Nkx2-1P50220 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Heatr3-201ENSMUST00000034079 3251 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Gm42872-201ENSMUST00000200026 1967 ntBASIC11.96□□□□□ -0.49
Nkx2-1P50220 Gins3-201ENSMUST00000034094 2519 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Hif3a-202ENSMUST00000108492 6402 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Bpifa3-202ENSMUST00000109746 1102 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Rnf186-201ENSMUST00000116094 1249 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Gm8097-201ENSMUST00000117903 829 ntBASIC11.96□□□□□ -0.49
Nkx2-1P50220 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Gm26620-201ENSMUST00000180542 817 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Smim22-208ENSMUST00000185147 399 ntAPPRIS ALT2 TSL 2 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Ankrd23-204ENSMUST00000194853 1073 ntTSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 CAAA01066804.1-201ENSMUST00000217800 611 ntTSL 3 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Slc35d2-204ENSMUST00000222168 472 ntTSL 3 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Rhog-201ENSMUST00000098230 1269 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.49
Nkx2-1P50220 B430305J03Rik-201ENSMUST00000066298 3702 ntAPPRIS P1 BASIC11.96□□□□□ -0.49
Nkx2-1P50220 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Hnrnpm-202ENSMUST00000114385 2550 ntTSL 2 BASIC11.96□□□□□ -0.5
Nkx2-1P50220 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Zfp236-201ENSMUST00000171071 9626 ntAPPRIS P2 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Srrm1-203ENSMUST00000105861 3797 ntAPPRIS ALT2 TSL 5 BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Gm36447-201ENSMUST00000201101 1978 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Rgp1-202ENSMUST00000107886 5888 ntAPPRIS P1 TSL 5 BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC11.96□□□□□ -0.5
Nkx2-1P50220 Srpx-203ENSMUST00000115544 1865 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Gpat2-201ENSMUST00000062211 2628 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Prx-203ENSMUST00000108355 5433 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Kcnk10-203ENSMUST00000221305 1357 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Ints3-202ENSMUST00000071488 4038 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Rnf141-201ENSMUST00000106682 1101 ntAPPRIS P1 TSL 3 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Trav13-3-201ENSMUST00000117226 336 ntBASIC11.95□□□□□ -0.5
Nkx2-1P50220 Chchd7-203ENSMUST00000119307 889 ntAPPRIS P1 TSL 2 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Eapp-203ENSMUST00000160085 676 ntTSL 3 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Epsti1-202ENSMUST00000169978 1175 ntAPPRIS ALT2 TSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Gm38575-201ENSMUST00000213881 652 ntTSL 2 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Epsti1-203ENSMUST00000227903 1178 ntAPPRIS ALT2 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Galnt6-203ENSMUST00000161514 2746 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Nfatc2-202ENSMUST00000074618 6637 ntAPPRIS P3 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Fbxl5-207ENSMUST00000124610 2306 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Slc39a13-202ENSMUST00000079976 1884 ntTSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Arl6ip1-201ENSMUST00000032888 2171 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Pxn-213ENSMUST00000202564 2126 ntTSL 5 BASIC11.95□□□□□ -0.5
Nkx2-1P50220 Slc45a1-201ENSMUST00000037827 3387 ntAPPRIS P2 TSL 1 (best) BASIC11.95□□□□□ -0.5
Retrieved 100 of 76,532 protein–RNA pairs in 30.5 ms