Protein–RNA interactions for Protein: P49135

Ercc3, General transcription and DNA repair factor IIH helicase subunit XPB, mousemouse

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ercc3P49135 Atp6v0b-201ENSMUST00000036380 1000 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Gm5771-201ENSMUST00000049079 798 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC17.14■□□□□ 0.33
Ercc3P49135 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC17.14■□□□□ 0.33
Ercc3P49135 Dnajc6-202ENSMUST00000094953 5322 ntAPPRIS P3 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC17.14■□□□□ 0.33
Ercc3P49135 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Ydjc-202ENSMUST00000115702 1713 ntTSL 5 BASIC17.13■□□□□ 0.33
Ercc3P49135 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Ercc3P49135 Gmppa-201ENSMUST00000037796 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 6530402F18Rik-203ENSMUST00000155949 4301 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Tbl1x-201ENSMUST00000088217 5234 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Sept1-201ENSMUST00000106313 1285 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ercc3P49135 Gm10044-204ENSMUST00000170177 659 ntTSL 3 BASIC17.13■□□□□ 0.33
Ercc3P49135 Gm8116-201ENSMUST00000182917 1201 ntBASIC17.13■□□□□ 0.33
Ercc3P49135 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC17.13■□□□□ 0.33
Ercc3P49135 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Klk1-201ENSMUST00000075162 954 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Pcolce2-201ENSMUST00000015498 4438 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Ube2g1-203ENSMUST00000138247 3931 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Atp2a2-202ENSMUST00000177974 3984 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Ppp1r1a-201ENSMUST00000023133 1306 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Camk1g-204ENSMUST00000169907 1968 ntTSL 5 BASIC17.13■□□□□ 0.33
Ercc3P49135 Cacna1g-201ENSMUST00000021234 8139 ntAPPRIS ALT2 TSL 5 BASIC17.13■□□□□ 0.33
Ercc3P49135 AC162938.1-201ENSMUST00000213140 2323 ntBASIC17.13■□□□□ 0.33
Ercc3P49135 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.13■□□□□ 0.33
Ercc3P49135 Ocrl-201ENSMUST00000001202 5253 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Gm4081-201ENSMUST00000195287 1838 ntBASIC17.12■□□□□ 0.33
Ercc3P49135 Glg1-204ENSMUST00000169020 7021 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ercc3P49135 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Gm25287-201ENSMUST00000103846 110 ntBASIC17.12■□□□□ 0.33
Ercc3P49135 Gm22918-201ENSMUST00000103855 110 ntBASIC17.12■□□□□ 0.33
Ercc3P49135 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Ercc3P49135 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC17.12■□□□□ 0.33
Ercc3P49135 Gm18766-201ENSMUST00000189811 808 ntBASIC17.12■□□□□ 0.33
Ercc3P49135 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Arf5-201ENSMUST00000020717 1116 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Malt1-201ENSMUST00000049248 5073 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Gm45504-201ENSMUST00000211407 2107 ntBASIC17.12■□□□□ 0.33
Ercc3P49135 Endod1-201ENSMUST00000167549 4470 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC17.12■□□□□ 0.33
Ercc3P49135 Hsd17b14-201ENSMUST00000107752 1400 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Ercc3P49135 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Ercc3P49135 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Ppp1r3d-201ENSMUST00000058678 3267 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ercc3P49135 Yap1-201ENSMUST00000065353 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Gm12522-201ENSMUST00000142833 2439 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Ercc3P49135 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC17.11■□□□□ 0.33
Ercc3P49135 Rasgef1c-202ENSMUST00000093141 2120 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Gpc6-201ENSMUST00000078849 1668 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC17.11■□□□□ 0.33
Ercc3P49135 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 H60b-201ENSMUST00000105522 1029 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Atf7ip2-203ENSMUST00000117220 1230 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Abhd11os-201ENSMUST00000136022 604 ntTSL 2 BASIC17.11■□□□□ 0.33
Ercc3P49135 Gm10253-201ENSMUST00000194270 940 ntBASIC17.11■□□□□ 0.33
Ercc3P49135 4930573H18Rik-201ENSMUST00000197696 906 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Lce1c-201ENSMUST00000047055 724 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Rtl8c-201ENSMUST00000063384 401 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ercc3P49135 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC17.11■□□□□ 0.33
Ercc3P49135 A530083I20Rik-203ENSMUST00000214426 1855 ntTSL 5 BASIC17.11■□□□□ 0.33
Ercc3P49135 Cask-204ENSMUST00000115438 8366 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Cdk6-201ENSMUST00000042410 2470 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Hist1h1e-201ENSMUST00000062045 1930 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Ercc3P49135 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC17.11■□□□□ 0.33
Ercc3P49135 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Miga1-202ENSMUST00000073089 4965 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC17.11■□□□□ 0.33
Ercc3P49135 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ercc3P49135 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Ppfia3-201ENSMUST00000003961 4647 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Ercc3P49135 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Tmod2-207ENSMUST00000215462 1564 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Ercc3P49135 Tbrg4-201ENSMUST00000000394 2290 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Dgkq-201ENSMUST00000053913 4938 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Ercc3P49135 Tpbg-202ENSMUST00000098500 3481 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 31 ms