Protein–RNA interactions for Protein: P48540

Gdnf, Glial cell line-derived neurotrophic factor, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GdnfP48540 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC12.66□□□□□ -0.38
GdnfP48540 Zbtb45-202ENSMUST00000172240 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Ptpn11-202ENSMUST00000100770 5599 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Atp6v0d1-201ENSMUST00000013304 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
GdnfP48540 Ssr1-204ENSMUST00000225319 1610 ntBASIC12.66□□□□□ -0.38
GdnfP48540 1300017J02Rik-201ENSMUST00000035163 2284 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 P2rx3-201ENSMUST00000028465 1812 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Gm12350-201ENSMUST00000121208 462 ntBASIC12.65□□□□□ -0.38
GdnfP48540 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Gm18489-201ENSMUST00000172565 551 ntBASIC12.65□□□□□ -0.38
GdnfP48540 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC12.65□□□□□ -0.38
GdnfP48540 1700039E22Rik-201ENSMUST00000174082 770 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Gm4899-201ENSMUST00000178708 719 ntBASIC12.65□□□□□ -0.38
GdnfP48540 Gm27628-201ENSMUST00000184911 107 ntBASIC12.65□□□□□ -0.38
GdnfP48540 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.65□□□□□ -0.38
GdnfP48540 AC138767.1-201ENSMUST00000222661 415 ntBASIC12.65□□□□□ -0.38
GdnfP48540 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GdnfP48540 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC12.65□□□□□ -0.38
GdnfP48540 Cyp4x1os-201ENSMUST00000153951 2003 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Adck5-214ENSMUST00000162503 2040 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
GdnfP48540 Cpne6-202ENSMUST00000163767 2004 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC12.65□□□□□ -0.38
GdnfP48540 P3h2-201ENSMUST00000039990 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Gm30238-201ENSMUST00000195528 2603 ntBASIC12.65□□□□□ -0.38
GdnfP48540 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Stk16-201ENSMUST00000027401 2876 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
GdnfP48540 Gm5184-201ENSMUST00000220417 1702 ntBASIC12.65□□□□□ -0.38
GdnfP48540 Alg3-201ENSMUST00000045918 1451 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
GdnfP48540 Syngap1-202ENSMUST00000177932 3927 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.39
GdnfP48540 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC12.65□□□□□ -0.39
GdnfP48540 Prickle3-201ENSMUST00000033485 2301 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.39
GdnfP48540 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
GdnfP48540 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.39
GdnfP48540 Dph5-204ENSMUST00000189799 1558 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GdnfP48540 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
GdnfP48540 Ltbp4-201ENSMUST00000038618 5386 ntAPPRIS P3 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Sun1-202ENSMUST00000078690 2608 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GdnfP48540 Ssh3-202ENSMUST00000113852 2735 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Ssh3-201ENSMUST00000037992 2728 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GdnfP48540 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Nxpe5-202ENSMUST00000159798 2568 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 9930104L06Rik-201ENSMUST00000094769 2911 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Rbbp8-201ENSMUST00000047322 3618 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 P2rx6-201ENSMUST00000023441 2345 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.64□□□□□ -0.39
GdnfP48540 Gm11453-201ENSMUST00000117318 1007 ntBASIC12.64□□□□□ -0.39
GdnfP48540 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 0610025J13Rik-201ENSMUST00000131324 652 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.64□□□□□ -0.39
GdnfP48540 Ccl27a-217ENSMUST00000155240 343 ntTSL 2 BASIC12.64□□□□□ -0.39
GdnfP48540 H2-T-ps-201ENSMUST00000172538 1067 ntBASIC12.64□□□□□ -0.39
GdnfP48540 Gm18558-201ENSMUST00000186253 1214 ntBASIC12.64□□□□□ -0.39
GdnfP48540 Wdyhv1-204ENSMUST00000226955 1094 ntBASIC12.64□□□□□ -0.39
GdnfP48540 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Pcgf5-211ENSMUST00000225920 6443 ntBASIC12.64□□□□□ -0.39
GdnfP48540 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 March8-213ENSMUST00000203193 4245 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
GdnfP48540 Gucd1-201ENSMUST00000039796 3500 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Gtse1-201ENSMUST00000170629 2721 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC12.64□□□□□ -0.39
GdnfP48540 Acot6-202ENSMUST00000222921 3622 ntBASIC12.64□□□□□ -0.39
GdnfP48540 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.64□□□□□ -0.39
GdnfP48540 Palld-203ENSMUST00000121493 5445 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Nptn-201ENSMUST00000085651 2024 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Lrrc8d-201ENSMUST00000060531 3923 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Socs3-201ENSMUST00000054002 2552 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Hmx2-201ENSMUST00000051997 3102 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
GdnfP48540 Marveld3-201ENSMUST00000001722 1330 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Klhl18-203ENSMUST00000198164 4538 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 A230072C01Rik-202ENSMUST00000136447 1412 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Lrriq4-202ENSMUST00000108267 2387 ntAPPRIS P3 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Gm37711-201ENSMUST00000194907 1749 ntTSL 5 BASIC12.63□□□□□ -0.39
GdnfP48540 Ccdc103-201ENSMUST00000021307 1841 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Tmem241-202ENSMUST00000055447 2597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Ndufs7-202ENSMUST00000105364 983 ntAPPRIS P1 TSL 5 BASIC12.63□□□□□ -0.39
GdnfP48540 Nkain4-202ENSMUST00000108873 865 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
GdnfP48540 Gm11764-201ENSMUST00000120221 623 ntBASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms