Protein–RNA interactions for Protein: P43488

Tnfsf4, Tumor necrosis factor ligand superfamily member 4, mousemouse

Predictions only

Length 198 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf4P43488 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Pear1-205ENSMUST00000172621 4490 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 4933435F18Rik-202ENSMUST00000154878 2174 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC13.95□□□□□ -0.18
Tnfsf4P43488 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Esrrb-206ENSMUST00000167891 1344 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Lrrc25-201ENSMUST00000052437 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Olfr718-ps1-202ENSMUST00000213631 4737 ntAPPRIS P5 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Gm9252-201ENSMUST00000172364 1602 ntBASIC13.94□□□□□ -0.18
Tnfsf4P43488 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Traf1-201ENSMUST00000028234 2069 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Cyp2t4-201ENSMUST00000108385 1599 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Apip-201ENSMUST00000011055 919 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Zmym3-208ENSMUST00000121429 1890 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Mir5131-201ENSMUST00000175426 93 ntBASIC13.94□□□□□ -0.18
Tnfsf4P43488 Mir5126-201ENSMUST00000175513 77 ntBASIC13.94□□□□□ -0.18
Tnfsf4P43488 Gm26769-201ENSMUST00000180469 619 ntTSL 3 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Khk-201ENSMUST00000031053 1257 ntTSL 5 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Izumo1r-201ENSMUST00000034409 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Rnf217-201ENSMUST00000081989 11013 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Gm10819-201ENSMUST00000099988 561 ntBASIC13.94□□□□□ -0.18
Tnfsf4P43488 Kcng1-202ENSMUST00000109191 4089 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Gm8281-202ENSMUST00000163719 1954 ntAPPRIS P1 TSL 5 BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Rbpms2-202ENSMUST00000169003 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Mok-202ENSMUST00000070565 1693 ntAPPRIS P1 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC13.94□□□□□ -0.18
Tnfsf4P43488 Dmxl1-202ENSMUST00000180611 11319 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Tdrd6-201ENSMUST00000045717 7055 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Klhl33-204ENSMUST00000227271 5513 ntAPPRIS P1 BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Cage1-202ENSMUST00000089840 3449 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Rasa4-202ENSMUST00000100570 2660 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Cdsn-201ENSMUST00000044804 2678 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Rnf135-201ENSMUST00000017839 1984 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Rps6ka5-209ENSMUST00000222731 5642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Gm16198-201ENSMUST00000118766 670 ntBASIC13.93□□□□□ -0.18
Tnfsf4P43488 Slc39a1-ps-201ENSMUST00000120862 969 ntBASIC13.93□□□□□ -0.18
Tnfsf4P43488 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Hddc3-206ENSMUST00000206074 565 ntTSL 2 BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Saa2-203ENSMUST00000210769 652 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Gm9182-201ENSMUST00000217829 639 ntBASIC13.93□□□□□ -0.18
Tnfsf4P43488 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Gckr-201ENSMUST00000072228 2014 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Pnkd-201ENSMUST00000027370 2937 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Zfyve27-207ENSMUST00000169536 5611 ntAPPRIS P3 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Catip-201ENSMUST00000097697 2101 ntAPPRIS P2 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.18
Tnfsf4P43488 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Camkk2-201ENSMUST00000111668 4861 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Chrnb1-201ENSMUST00000045971 2155 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Etv3-202ENSMUST00000119109 5309 ntAPPRIS P2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Bag2-203ENSMUST00000187602 378 ntTSL 2 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 G0s2-201ENSMUST00000009777 871 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Clcnkb-202ENSMUST00000105788 2490 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Olfr317-203ENSMUST00000216196 2781 ntAPPRIS P1 TSL 5 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Mmp14-206ENSMUST00000225641 3238 ntBASIC13.92□□□□□ -0.18
Tnfsf4P43488 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Cenpl-203ENSMUST00000111620 1910 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Elovl6-205ENSMUST00000199910 2610 ntAPPRIS P1 TSL 1 (best) BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC13.92□□□□□ -0.18
Tnfsf4P43488 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Klc2-201ENSMUST00000025798 2940 ntTSL 5 BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.91□□□□□ -0.18
Tnfsf4P43488 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.91□□□□□ -0.18
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms