Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Tbxas1-201ENSMUST00000003017 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HttP42859 Clstn1-201ENSMUST00000039144 3319 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HttP42859 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.05■□□□□ -0
HttP42859 Zfp157-203ENSMUST00000110912 886 ntTSL 3 BASIC15.05■□□□□ -0
HttP42859 Dctn6-203ENSMUST00000118811 934 ntTSL 3 BASIC15.05■□□□□ -0
HttP42859 Cox16-204ENSMUST00000166723 579 ntTSL 2 BASIC15.05■□□□□ -0
HttP42859 Mir6927-201ENSMUST00000184494 71 ntBASIC15.05■□□□□ -0
HttP42859 Gm29501-201ENSMUST00000186133 530 ntTSL 5 BASIC15.05■□□□□ -0
HttP42859 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HttP42859 4930442H23Rik-201ENSMUST00000056086 1245 ntAPPRIS P1 BASIC15.05■□□□□ -0
HttP42859 Slc35b1-201ENSMUST00000021243 1523 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HttP42859 Jaml-204ENSMUST00000215880 1704 ntAPPRIS P1 TSL 1 (best) BASIC15.05■□□□□ -0
HttP42859 Zic3-202ENSMUST00000088629 1951 ntTSL 1 (best) BASIC15.05■□□□□ -0
HttP42859 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC15.04■□□□□ -0
HttP42859 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Oprm1-214ENSMUST00000105605 1503 ntTSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Oprm1-201ENSMUST00000000783 1500 ntTSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Gm11439-201ENSMUST00000118598 409 ntBASIC15.04■□□□□ -0
HttP42859 Gm7008-202ENSMUST00000170019 402 ntTSL 2 BASIC15.04■□□□□ -0
HttP42859 Trmt112-ps1-201ENSMUST00000202320 375 ntBASIC15.04■□□□□ -0
HttP42859 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HttP42859 Otud5-202ENSMUST00000115665 3821 ntTSL 5 BASIC15.04■□□□□ -0
HttP42859 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Cdc42se2-201ENSMUST00000064104 3069 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HttP42859 Selenot-ps-201ENSMUST00000119098 593 ntBASIC15.04■□□□□ -0
HttP42859 Rpl13-ps1-201ENSMUST00000121801 668 ntBASIC15.04■□□□□ -0
HttP42859 D9Wsu149-201ENSMUST00000214169 594 ntBASIC15.04■□□□□ -0
HttP42859 Prr23a3-201ENSMUST00000167951 1817 ntAPPRIS P1 BASIC15.04■□□□□ -0
HttP42859 Dsn1-202ENSMUST00000103130 2636 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Tsta3-201ENSMUST00000023231 1311 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 1700088E04Rik-212ENSMUST00000190959 1403 ntAPPRIS P1 TSL 5 BASIC15.04■□□□□ -0
HttP42859 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC15.04■□□□□ -0
HttP42859 Zfp865-203ENSMUST00000085427 2751 ntTSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Pax7-202ENSMUST00000174681 1725 ntAPPRIS ALT1 TSL 5 BASIC15.04■□□□□ -0
HttP42859 Hira-201ENSMUST00000004222 4218 ntAPPRIS P1 TSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.04■□□□□ -0
HttP42859 Fgf8-203ENSMUST00000111924 630 ntTSL 5 BASIC15.03■□□□□ -0
HttP42859 Mir1943-201ENSMUST00000158276 73 ntBASIC15.03■□□□□ -0
HttP42859 Gm29856-201ENSMUST00000191905 1257 ntTSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Calca-204ENSMUST00000205714 416 ntTSL 2 BASIC15.03■□□□□ -0
HttP42859 AC154680.1-201ENSMUST00000224376 859 ntBASIC15.03■□□□□ -0
HttP42859 Gm21009-201ENSMUST00000197169 1669 ntBASIC15.03■□□□□ -0
HttP42859 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC15.03■□□□□ -0
HttP42859 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HttP42859 Cspp1-205ENSMUST00000122156 2535 ntTSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Atxn7l3-201ENSMUST00000073234 3688 ntAPPRIS ALT1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Sos2-206ENSMUST00000183277 4512 ntAPPRIS ALT2 TSL 5 BASIC15.03■□□□□ -0
HttP42859 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Gm11839-201ENSMUST00000120647 1953 ntBASIC15.03■□□□□ -0
HttP42859 Ddx20-201ENSMUST00000090680 2905 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Pnck-203ENSMUST00000114473 1492 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Gm14028-201ENSMUST00000117434 479 ntBASIC15.03■□□□□ -0
HttP42859 Gstt1-202ENSMUST00000120177 1105 ntTSL 2 BASIC15.03■□□□□ -0
HttP42859 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC15.03■□□□□ -0
HttP42859 4930448E22Rik-202ENSMUST00000215242 2102 ntTSL 5 BASIC15.03■□□□□ -0
HttP42859 Fam92b-201ENSMUST00000048786 1187 ntAPPRIS P1 TSL 5 BASIC15.03■□□□□ -0
HttP42859 Cryba2-201ENSMUST00000006721 720 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Cyp1a2-201ENSMUST00000034860 1940 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Carlr-201ENSMUST00000181515 2574 ntBASIC15.03■□□□□ -0
HttP42859 Parg-204ENSMUST00000164137 3013 ntTSL 5 BASIC15.03■□□□□ -0
HttP42859 Gm14730-201ENSMUST00000122378 1045 ntBASIC15.03■□□□□ -0
HttP42859 Nbdy-201ENSMUST00000140575 788 ntAPPRIS ALT2 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Nbdy-202ENSMUST00000149514 775 ntAPPRIS ALT2 TSL 2 BASIC15.03■□□□□ -0
HttP42859 Gm15917-201ENSMUST00000162771 487 ntTSL 2 BASIC15.03■□□□□ -0
HttP42859 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Gm7498-201ENSMUST00000203282 1084 ntBASIC15.03■□□□□ -0
HttP42859 Gm9826-201ENSMUST00000029124 1299 ntBASIC15.03■□□□□ -0
HttP42859 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Lhx5-201ENSMUST00000031591 2689 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Fyn-202ENSMUST00000099967 3528 ntAPPRIS P1 TSL 1 (best) BASIC15.03■□□□□ -0
HttP42859 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC15.03■□□□□ -0
HttP42859 Neurl4-201ENSMUST00000061837 5188 ntAPPRIS P3 TSL 5 BASIC15.02■□□□□ -0
HttP42859 Ppt2-201ENSMUST00000064953 1729 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
HttP42859 Bnip3l-ps-201ENSMUST00000101577 657 ntBASIC15.02■□□□□ -0
HttP42859 1700125G22Rik-201ENSMUST00000181124 861 ntTSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Gm39929-201ENSMUST00000209672 693 ntTSL 3 BASIC15.02■□□□□ -0
HttP42859 Bnip3l-ps-202ENSMUST00000220709 1132 ntBASIC15.02■□□□□ -0
HttP42859 Morn3-201ENSMUST00000031437 1128 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Fam96a-201ENSMUST00000034945 1240 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Il27-201ENSMUST00000058429 1021 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Coq7-202ENSMUST00000098090 1215 ntTSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Pom121l2-202ENSMUST00000117882 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.02■□□□□ -0
HttP42859 Gm13859-201ENSMUST00000119936 1423 ntBASIC15.02■□□□□ -0
HttP42859 Igdcc3-201ENSMUST00000034961 3146 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Rab3a-203ENSMUST00000110092 1556 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Fam219b-202ENSMUST00000114200 3017 ntAPPRIS P1 TSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Gm17518-201ENSMUST00000181232 1346 ntTSL 1 (best) BASIC15.02■□□□□ -0
HttP42859 Taf6l-202ENSMUST00000010249 848 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms