Protein–RNA interactions for Protein: P42586

Nkx2-2, Homeobox protein Nkx-2.2, mousemouse

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx2-2P42586 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC13.24□□□□□ -0.29
Nkx2-2P42586 Bcat2-202ENSMUST00000120864 1536 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Pex3-202ENSMUST00000105539 1961 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm14221-202ENSMUST00000209603 1437 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Scrt1-201ENSMUST00000096365 4010 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 1110008P14Rik-202ENSMUST00000146423 2618 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Zfp606-201ENSMUST00000098822 4748 ntAPPRIS P3 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm5478-201ENSMUST00000100184 2566 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Ppp1r15b-201ENSMUST00000052529 5594 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm22065-201ENSMUST00000103753 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm22066-201ENSMUST00000103761 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm24932-201ENSMUST00000103763 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm24115-201ENSMUST00000103799 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm22190-201ENSMUST00000103827 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm22191-201ENSMUST00000103831 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm24721-201ENSMUST00000103849 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm28018-201ENSMUST00000103869 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm26399-201ENSMUST00000103937 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm6736-201ENSMUST00000166583 948 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm25349-201ENSMUST00000177728 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm23616-201ENSMUST00000177797 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm25871-201ENSMUST00000177816 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm24752-201ENSMUST00000178240 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm24496-201ENSMUST00000178287 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm25649-201ENSMUST00000178476 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm25548-201ENSMUST00000178681 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm9824-201ENSMUST00000178707 561 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm23147-201ENSMUST00000178841 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm26095-201ENSMUST00000179270 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm22171-201ENSMUST00000179283 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm23936-201ENSMUST00000179354 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm22619-201ENSMUST00000179516 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm25255-201ENSMUST00000179579 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm24755-201ENSMUST00000179691 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm26506-201ENSMUST00000179692 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm25086-201ENSMUST00000179931 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm23243-201ENSMUST00000180047 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm24659-201ENSMUST00000180212 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm24169-201ENSMUST00000180244 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm23689-201ENSMUST00000180354 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm27359-201ENSMUST00000184153 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm27785-201ENSMUST00000184268 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm27466-201ENSMUST00000184396 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gm27703-201ENSMUST00000184836 110 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Fgfr1op2-201ENSMUST00000037836 687 ntTSL 3 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Acot6-201ENSMUST00000056822 3388 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Pum2-202ENSMUST00000111122 6311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Tchh-201ENSMUST00000064257 5823 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Fam8a1-201ENSMUST00000099547 3664 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Ssr1-204ENSMUST00000225319 1610 ntBASIC13.23□□□□□ -0.29
Nkx2-2P42586 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Patz1-201ENSMUST00000057089 3118 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Gpsm1-203ENSMUST00000078616 3127 ntTSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Ptdss1-201ENSMUST00000021990 3424 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Sergef-201ENSMUST00000033127 1465 ntAPPRIS P1 TSL 1 (best) BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC13.23□□□□□ -0.29
Nkx2-2P42586 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.22□□□□□ -0.29
Nkx2-2P42586 Sorbs3-204ENSMUST00000227929 2460 ntBASIC13.22□□□□□ -0.29
Nkx2-2P42586 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Fbxl19-207ENSMUST00000206893 3449 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Ccdc117-201ENSMUST00000020776 3372 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Myo9b-201ENSMUST00000071935 7082 ntAPPRIS P3 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Irx3os-201ENSMUST00000062522 2988 ntTSL 5 BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Espn-220ENSMUST00000207676 4618 ntAPPRIS ALT2 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Ralgapa2-211ENSMUST00000228797 8245 ntAPPRIS ALT2 BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Kif3a-201ENSMUST00000057330 2290 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Tsc22d1-202ENSMUST00000048371 4818 ntTSL 1 (best) BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC13.22□□□□□ -0.29
Nkx2-2P42586 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.22□□□□□ -0.29
Retrieved 100 of 76,532 protein–RNA pairs in 24.6 ms