Protein–RNA interactions for Protein: P41274

Tnfsf9, Tumor necrosis factor ligand superfamily member 9, mousemouse

Predictions only

Length 309 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfsf9P41274 Kcnip4-201ENSMUST00000087395 2366 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Gm26840-201ENSMUST00000180784 2980 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Cgn-203ENSMUST00000153263 2210 ntTSL 2 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Gm12428-201ENSMUST00000119844 727 ntBASIC13.81□□□□□ -0.2
Tnfsf9P41274 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Gm27680-201ENSMUST00000184192 160 ntBASIC13.81□□□□□ -0.2
Tnfsf9P41274 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Gm5626-201ENSMUST00000222151 1058 ntBASIC13.81□□□□□ -0.2
Tnfsf9P41274 Ceacam16-201ENSMUST00000014830 1635 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Cdr2l-201ENSMUST00000053288 3700 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 4930438A08Rik-201ENSMUST00000108834 2093 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Vsig10-202ENSMUST00000111967 4236 ntAPPRIS P2 TSL 5 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Gm6297-201ENSMUST00000181475 2146 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Atp2a3-207ENSMUST00000163326 4606 ntAPPRIS ALT2 TSL 5 BASIC13.81□□□□□ -0.2
Tnfsf9P41274 Tcf3-208ENSMUST00000105344 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Eif2a-201ENSMUST00000029387 2299 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Eif4g3-203ENSMUST00000084215 8134 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Bin2-207ENSMUST00000183211 2036 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Cdca5-201ENSMUST00000025704 2024 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Mir1897-201ENSMUST00000122581 272 ntBASIC13.8□□□□□ -0.2
Tnfsf9P41274 Gm27631-201ENSMUST00000184163 466 ntBASIC13.8□□□□□ -0.2
Tnfsf9P41274 2610008E11Rik-204ENSMUST00000220220 799 ntTSL 2 BASIC13.8□□□□□ -0.2
Tnfsf9P41274 AC149588.3-201ENSMUST00000227515 150 ntBASIC13.8□□□□□ -0.2
Tnfsf9P41274 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 2610028D06Rik-201ENSMUST00000215216 1713 ntBASIC13.8□□□□□ -0.2
Tnfsf9P41274 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Psmd5-201ENSMUST00000028225 4397 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Nck1-202ENSMUST00000116522 4476 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Tnfsf9P41274 Phldb1-210ENSMUST00000134465 5244 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Insc-201ENSMUST00000117543 2170 ntAPPRIS P1 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Fstl1-201ENSMUST00000114763 3789 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Gm15653-201ENSMUST00000119247 907 ntBASIC13.79□□□□□ -0.2
Tnfsf9P41274 Fbxo41-203ENSMUST00000161546 6357 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Gm45453-201ENSMUST00000211758 853 ntBASIC13.79□□□□□ -0.2
Tnfsf9P41274 Gm9063-201ENSMUST00000223299 582 ntBASIC13.79□□□□□ -0.2
Tnfsf9P41274 Dupd1-202ENSMUST00000224735 548 ntBASIC13.79□□□□□ -0.2
Tnfsf9P41274 Shd-206ENSMUST00000225145 998 ntBASIC13.79□□□□□ -0.2
Tnfsf9P41274 Zbtb4-201ENSMUST00000108638 2552 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Clec2h-201ENSMUST00000032518 2160 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Pdgfrl-201ENSMUST00000034004 1548 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Wac-201ENSMUST00000074919 3070 ntTSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Steap2-202ENSMUST00000115424 3285 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Fuca1-201ENSMUST00000030434 2525 ntAPPRIS P1 TSL 1 (best) BASIC13.79□□□□□ -0.2
Tnfsf9P41274 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Nxnl1-202ENSMUST00000163659 2730 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Slc35c2-201ENSMUST00000017808 1843 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Adgrg5-205ENSMUST00000166802 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Tnfsf9P41274 Slc4a5-203ENSMUST00000113900 3630 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 45.5 ms