Protein–RNA interactions for Protein: P41233

Abca1, ATP-binding cassette sub-family A member 1, mousemouse

Predictions only

Length 2,261 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Abca1P41233 Gm45133-201ENSMUST00000207548 2773 ntBASIC12.02□□□□□ -0.48
Abca1P41233 Kcnb1-204ENSMUST00000207917 11153 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abca1P41233 E2f3-203ENSMUST00000221536 4597 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abca1P41233 E2f3-204ENSMUST00000222730 4579 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Abca1P41233 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Slc4a1ap-206ENSMUST00000201858 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Klk2-ps-201ENSMUST00000205342 571 ntBASIC12.02□□□□□ -0.49
Abca1P41233 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.02□□□□□ -0.49
Abca1P41233 Nup37-201ENSMUST00000052355 1267 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Zfp467-205ENSMUST00000114560 3266 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Dpp6-204ENSMUST00000122171 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Abca1P41233 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Rreb1-202ENSMUST00000110237 4617 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 G630022F23Rik-201ENSMUST00000202923 3627 ntBASIC12.02□□□□□ -0.49
Abca1P41233 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC12.02□□□□□ -0.49
Abca1P41233 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Cyp2d10-201ENSMUST00000072776 1647 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Camta1-203ENSMUST00000105668 4962 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Gm9913-201ENSMUST00000066157 2793 ntAPPRIS P1 BASIC12.02□□□□□ -0.49
Abca1P41233 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC12.02□□□□□ -0.49
Abca1P41233 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Pla2g2e-202ENSMUST00000105803 381 ntTSL 5 BASIC12.02□□□□□ -0.49
Abca1P41233 Rps13-ps4-201ENSMUST00000117927 456 ntBASIC12.02□□□□□ -0.49
Abca1P41233 Rps13-ps5-201ENSMUST00000117939 456 ntBASIC12.02□□□□□ -0.49
Abca1P41233 Gm15483-201ENSMUST00000120338 456 ntBASIC12.02□□□□□ -0.49
Abca1P41233 Gm15321-201ENSMUST00000121290 288 ntBASIC12.02□□□□□ -0.49
Abca1P41233 Gm18062-201ENSMUST00000208020 547 ntBASIC12.02□□□□□ -0.49
Abca1P41233 Gm18055-201ENSMUST00000208254 547 ntBASIC12.02□□□□□ -0.49
Abca1P41233 Letm2-213ENSMUST00000211422 738 ntTSL 5 BASIC12.02□□□□□ -0.49
Abca1P41233 Pabpn1l-201ENSMUST00000093059 1148 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Ipo8-201ENSMUST00000048418 5360 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Exoc6-201ENSMUST00000066439 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Rplp0-201ENSMUST00000086519 1358 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Abca1P41233 Mbp-206ENSMUST00000102812 2108 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Abca1P41233 Tmem30a-202ENSMUST00000120690 3627 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Abca1P41233 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC12.01□□□□□ -0.49
Abca1P41233 Stard7-201ENSMUST00000110374 1530 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Zfp184-202ENSMUST00000102978 3198 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Abca1P41233 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Lurap1-201ENSMUST00000030469 5742 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Nrros-201ENSMUST00000099991 2548 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Gid4-201ENSMUST00000070681 4283 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Cdkn1b-203ENSMUST00000204807 1757 ntAPPRIS P1 TSL 5 BASIC12.01□□□□□ -0.49
Abca1P41233 Rsbn1-201ENSMUST00000051139 4762 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Slc9a3r1-201ENSMUST00000021077 1925 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Vrk3-201ENSMUST00000002275 1969 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 4932443L11Rik-201ENSMUST00000148353 414 ntTSL 5 BASIC12.01□□□□□ -0.49
Abca1P41233 Il11-202ENSMUST00000163481 990 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Gm38293-201ENSMUST00000193209 600 ntTSL 2 BASIC12.01□□□□□ -0.49
Abca1P41233 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Dr1-201ENSMUST00000031190 3085 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Lrp11-203ENSMUST00000130590 3220 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Efnb1-201ENSMUST00000052839 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Cxcr3-201ENSMUST00000056614 1731 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.01□□□□□ -0.49
Abca1P41233 Slc8a2-201ENSMUST00000168693 4171 ntAPPRIS ALT2 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Foxi1-201ENSMUST00000060271 2357 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Pard3-222ENSMUST00000162536 5175 ntAPPRIS ALT2 TSL 5 BASIC12.01□□□□□ -0.49
Abca1P41233 Tomm6os-201ENSMUST00000155812 2944 ntTSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.01□□□□□ -0.49
Abca1P41233 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12□□□□□ -0.49
Abca1P41233 Hist3h2bb-ps-201ENSMUST00000117558 465 ntBASIC12□□□□□ -0.49
Abca1P41233 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC12□□□□□ -0.49
Abca1P41233 Gm15222-201ENSMUST00000127359 344 ntTSL 3 BASIC12□□□□□ -0.49
Abca1P41233 1700034H15Rik-202ENSMUST00000139827 4354 ntTSL 5 BASIC12□□□□□ -0.49
Abca1P41233 Gm9719-201ENSMUST00000162765 543 ntBASIC12□□□□□ -0.49
Abca1P41233 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Abca1P41233 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC12□□□□□ -0.49
Abca1P41233 Aurkc-204ENSMUST00000208049 1401 ntAPPRIS ALT2 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Gm7775-201ENSMUST00000218871 853 ntBASIC12□□□□□ -0.49
Abca1P41233 AC125350.2-201ENSMUST00000224737 727 ntBASIC12□□□□□ -0.49
Abca1P41233 Cd2bp2-201ENSMUST00000035771 1309 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Gns-201ENSMUST00000040344 3855 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Gm6180-201ENSMUST00000065243 498 ntBASIC12□□□□□ -0.49
Abca1P41233 Ociad1-202ENSMUST00000071081 1311 ntTSL 3 BASIC12□□□□□ -0.49
Abca1P41233 Irs2-201ENSMUST00000040514 6323 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Tango6-202ENSMUST00000211979 2722 ntTSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Chst8-204ENSMUST00000205259 1980 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Abca1P41233 Gpr153-202ENSMUST00000105650 3838 ntAPPRIS ALT2 TSL 5 BASIC12□□□□□ -0.49
Abca1P41233 Ldb3-208ENSMUST00000228044 1883 ntAPPRIS ALT2 BASIC12□□□□□ -0.49
Abca1P41233 Gm3045-201ENSMUST00000212844 1825 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Abca1P41233 Cldn14-201ENSMUST00000050962 1457 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC12□□□□□ -0.49
Abca1P41233 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC12□□□□□ -0.49
Abca1P41233 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC12□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.3 ms