Protein–RNA interactions for Protein: P39749

Fen1, Flap endonuclease 1, mousemouse

Predictions only

Length 378 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Fen1P39749 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.54□□□□□ -0.08
Fen1P39749 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.54□□□□□ -0.08
Fen1P39749 Mzf1-204ENSMUST00000182490 2872 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC14.54□□□□□ -0.08
Fen1P39749 Ripk4-201ENSMUST00000019386 3541 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Mdga2-201ENSMUST00000037181 9833 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Fen1P39749 Penk-201ENSMUST00000070375 1449 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Gm13884-201ENSMUST00000118103 829 ntBASIC14.53□□□□□ -0.08
Fen1P39749 Gm11452-201ENSMUST00000122376 690 ntBASIC14.53□□□□□ -0.08
Fen1P39749 5830454E08Rik-202ENSMUST00000213974 744 ntBASIC14.53□□□□□ -0.08
Fen1P39749 AC159106.1-201ENSMUST00000224421 690 ntBASIC14.53□□□□□ -0.08
Fen1P39749 Sfxn5-202ENSMUST00000059034 1081 ntAPPRIS ALT2 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Fen1P39749 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Atp2a3-204ENSMUST00000108486 4540 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Fen1P39749 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Gm19863-201ENSMUST00000192480 2218 ntBASIC14.53□□□□□ -0.08
Fen1P39749 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Fen1P39749 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 Acp6-201ENSMUST00000090759 1754 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 Acin1-224ENSMUST00000167015 1746 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 Tmem88-201ENSMUST00000050140 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 Lmna-202ENSMUST00000036252 1536 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 Slc25a25-203ENSMUST00000113307 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 Slc9a3-201ENSMUST00000036208 2490 ntAPPRIS P2 TSL 2 BASIC14.52□□□□□ -0.08
Fen1P39749 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC14.52□□□□□ -0.08
Fen1P39749 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Fen1P39749 5730559C18Rik-201ENSMUST00000120339 2988 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fen1P39749 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC14.52□□□□□ -0.09
Fen1P39749 Gm20496-202ENSMUST00000173770 523 ntTSL 5 BASIC14.52□□□□□ -0.09
Fen1P39749 Treml1-204ENSMUST00000224001 1220 ntAPPRIS P2 BASIC14.52□□□□□ -0.09
Fen1P39749 Hist1h3c-201ENSMUST00000091752 630 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Fen1P39749 Aatk-201ENSMUST00000064307 5336 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fen1P39749 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fen1P39749 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fen1P39749 Grm6-201ENSMUST00000000631 4291 ntAPPRIS P1 TSL 5 BASIC14.52□□□□□ -0.09
Fen1P39749 AC166574.6-201ENSMUST00000227889 1806 ntBASIC14.52□□□□□ -0.09
Fen1P39749 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fen1P39749 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fen1P39749 Krt14-201ENSMUST00000007272 1698 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Fen1P39749 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Fen1P39749 Fam19a4-201ENSMUST00000089295 2190 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Car7-201ENSMUST00000056051 1538 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Fen1P39749 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Fen1P39749 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Prdm10-202ENSMUST00000117389 1952 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Gstt2-201ENSMUST00000038257 1370 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Pih1d1-202ENSMUST00000107811 1072 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Rasgrp2-205ENSMUST00000113471 535 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 9430038I01Rik-202ENSMUST00000117404 699 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Ascl2-202ENSMUST00000121862 814 ntAPPRIS ALT2 BASIC14.51□□□□□ -0.09
Fen1P39749 Gm12536-201ENSMUST00000129102 358 ntTSL 2 BASIC14.51□□□□□ -0.09
Fen1P39749 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Hrh3-204ENSMUST00000165248 1224 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Syne4-208ENSMUST00000176304 1006 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Gm4535-201ENSMUST00000182274 558 ntBASIC14.51□□□□□ -0.09
Fen1P39749 Atp5o-201ENSMUST00000023677 838 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Rangrf-201ENSMUST00000038644 820 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Chmp2a-201ENSMUST00000005711 949 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Gm10355-201ENSMUST00000097146 517 ntBASIC14.51□□□□□ -0.09
Fen1P39749 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Matn2-206ENSMUST00000228570 2798 ntBASIC14.51□□□□□ -0.09
Fen1P39749 Mbp-205ENSMUST00000091789 4797 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Kpna6-201ENSMUST00000003828 2195 ntAPPRIS ALT1 TSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Uros-203ENSMUST00000106145 1644 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Dmkn-204ENSMUST00000085691 2007 ntAPPRIS P4 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Gm26547-201ENSMUST00000181186 1508 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 4933434E20Rik-203ENSMUST00000068798 1500 ntTSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC14.51□□□□□ -0.09
Fen1P39749 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Fen1P39749 Stap2-201ENSMUST00000043785 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC14.5□□□□□ -0.09
Fen1P39749 Pou2f3-202ENSMUST00000176636 2522 ntAPPRIS P2 TSL 1 (best) BASIC14.5□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 33.4 ms