Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Crybb1-202ENSMUST00000112375 793 ntAPPRIS P1 TSL 3 BASIC12.42□□□□□ -0.42
Slc6a1P31648 Drap1-202ENSMUST00000113673 744 ntTSL 2 BASIC12.42□□□□□ -0.42
Slc6a1P31648 Cacnb2-202ENSMUST00000114719 2117 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Trmt112-202ENSMUST00000116551 985 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Upp1-205ENSMUST00000164791 1252 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Gm1818-201ENSMUST00000169406 1184 ntBASIC12.42□□□□□ -0.42
Slc6a1P31648 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.42□□□□□ -0.42
Slc6a1P31648 Setd1b-204ENSMUST00000163030 8857 ntAPPRIS P2 TSL 5 BASIC12.42□□□□□ -0.42
Slc6a1P31648 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.42□□□□□ -0.42
Slc6a1P31648 Il1rapl2-202ENSMUST00000113063 3437 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Efemp2-204ENSMUST00000165485 1557 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Rnf123-214ENSMUST00000162355 4727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.42□□□□□ -0.42
Slc6a1P31648 Pcdh10-201ENSMUST00000166126 7081 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Zfp672-204ENSMUST00000108829 3094 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Slc6a1P31648 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC12.41□□□□□ -0.42
Slc6a1P31648 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 P2rx3-202ENSMUST00000111613 1764 ntAPPRIS ALT1 TSL 5 BASIC12.41□□□□□ -0.42
Slc6a1P31648 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Creg2-201ENSMUST00000053355 6091 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Gm13884-201ENSMUST00000118103 829 ntBASIC12.41□□□□□ -0.42
Slc6a1P31648 Ndufa5-202ENSMUST00000118558 315 ntTSL 2 BASIC12.41□□□□□ -0.42
Slc6a1P31648 Tmem208-201ENSMUST00000015000 785 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Gm15677-201ENSMUST00000152302 766 ntTSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Rnf5-201ENSMUST00000015622 1238 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Cabp2-205ENSMUST00000162908 911 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Gm18733-201ENSMUST00000173950 856 ntBASIC12.41□□□□□ -0.42
Slc6a1P31648 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.41□□□□□ -0.42
Slc6a1P31648 Gm5864-201ENSMUST00000202263 970 ntBASIC12.41□□□□□ -0.42
Slc6a1P31648 Gm44771-201ENSMUST00000206975 626 ntBASIC12.41□□□□□ -0.42
Slc6a1P31648 Gm19164-201ENSMUST00000210667 640 ntBASIC12.41□□□□□ -0.42
Slc6a1P31648 Tac4-201ENSMUST00000021242 1251 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 AC133183.1-201ENSMUST00000221229 429 ntAPPRIS P1 TSL 3 BASIC12.41□□□□□ -0.42
Slc6a1P31648 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.41□□□□□ -0.42
Slc6a1P31648 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Ydjc-201ENSMUST00000069064 1297 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Dupd1-201ENSMUST00000073870 1138 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Hbb-bt-201ENSMUST00000098192 703 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Pbx3-202ENSMUST00000113132 2734 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Add3-202ENSMUST00000050096 4488 ntAPPRIS ALT1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Trim27-206ENSMUST00000222544 4312 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Slc6a1P31648 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.41□□□□□ -0.42
Slc6a1P31648 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Gm45844-204ENSMUST00000209833 1524 ntAPPRIS ALT2 TSL 5 BASIC12.41□□□□□ -0.42
Slc6a1P31648 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Kcnh2-201ENSMUST00000036092 4221 ntAPPRIS P1 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Pik3cd-204ENSMUST00000105690 4921 ntAPPRIS P4 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.41□□□□□ -0.42
Slc6a1P31648 Rrnad1-206ENSMUST00000160074 1620 ntTSL 5 BASIC12.4□□□□□ -0.42
Slc6a1P31648 Tfe3-202ENSMUST00000079542 3163 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Tmprss11d-202ENSMUST00000122377 2256 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Cald1-201ENSMUST00000031775 2142 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Slc6a1P31648 Hpca-203ENSMUST00000116442 1568 ntAPPRIS P1 TSL 3 BASIC12.4□□□□□ -0.42
Slc6a1P31648 Chrnd-202ENSMUST00000186373 2949 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Aifm3-202ENSMUST00000115685 2357 ntAPPRIS ALT1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Slc6a1P31648 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Gm27177-205ENSMUST00000184792 706 ntTSL 5 BASIC12.4□□□□□ -0.42
Slc6a1P31648 Nudt14-203ENSMUST00000221497 355 ntTSL 2 BASIC12.4□□□□□ -0.42
Slc6a1P31648 Rbfox2-207ENSMUST00000227533 1041 ntBASIC12.4□□□□□ -0.42
Slc6a1P31648 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Slc6a1P31648 Ackr4-204ENSMUST00000219146 1654 ntAPPRIS P1 TSL 5 BASIC12.4□□□□□ -0.42
Slc6a1P31648 Caprin2-202ENSMUST00000111569 3697 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Ndufv2-203ENSMUST00000143987 1540 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Cbarp-214ENSMUST00000169546 2980 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Slc6a1P31648 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.42
Slc6a1P31648 Gck-202ENSMUST00000109822 1786 ntTSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Col1a1-201ENSMUST00000001547 5930 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC12.4□□□□□ -0.42
Slc6a1P31648 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC12.4□□□□□ -0.43
Slc6a1P31648 Sept8-207ENSMUST00000147912 1742 ntAPPRIS ALT2 TSL 5 BASIC12.4□□□□□ -0.43
Slc6a1P31648 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC12.4□□□□□ -0.43
Slc6a1P31648 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Sp6-202ENSMUST00000107622 3621 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Slc39a4-201ENSMUST00000073428 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Ccdc162-203ENSMUST00000099932 2742 ntTSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Ccser2-202ENSMUST00000090024 7509 ntAPPRIS P1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Slc6a1P31648 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC12.39□□□□□ -0.43
Slc6a1P31648 Rbm3-206ENSMUST00000115621 1338 ntAPPRIS ALT1 TSL 1 (best) BASIC12.39□□□□□ -0.43
Retrieved 100 of 76,532 protein–RNA pairs in 35.5 ms