Protein–RNA interactions for Protein: P25318

Col8a2, Collagen alpha-2(VIII) chain, mousemouse

Predictions only

Length 699 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a2P25318 Myoz3-201ENSMUST00000056533 870 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Ggn-205ENSMUST00000209019 2148 ntAPPRIS ALT2 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 2510009E07Rik-201ENSMUST00000053336 5164 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Zhx1-201ENSMUST00000070143 4764 ntAPPRIS P1 TSL 1 (best) BASIC12.05□□□□□ -0.48
Col8a2P25318 Fam192a-201ENSMUST00000034226 2873 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Braf-201ENSMUST00000002487 9728 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Mapt-203ENSMUST00000106989 2250 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col8a2P25318 0610009E02Rik-201ENSMUST00000133463 1609 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Gm9252-201ENSMUST00000172364 1602 ntBASIC12.04□□□□□ -0.48
Col8a2P25318 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Snrpn-202ENSMUST00000098402 2076 ntAPPRIS P1 TSL 5 BASIC12.04□□□□□ -0.48
Col8a2P25318 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Sash1-201ENSMUST00000015449 7183 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Mbtd1-202ENSMUST00000063718 3785 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Nr3c2-203ENSMUST00000109912 5675 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Antxr2-201ENSMUST00000031281 5656 ntAPPRIS P2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Gm24543-201ENSMUST00000103867 82 ntBASIC12.04□□□□□ -0.48
Col8a2P25318 Zfp637-202ENSMUST00000112859 421 ntTSL 2 BASIC12.04□□□□□ -0.48
Col8a2P25318 Gm6539-201ENSMUST00000119157 1064 ntBASIC12.04□□□□□ -0.48
Col8a2P25318 Gm14057-201ENSMUST00000120631 482 ntBASIC12.04□□□□□ -0.48
Col8a2P25318 Gm15487-201ENSMUST00000122373 465 ntBASIC12.04□□□□□ -0.48
Col8a2P25318 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC12.04□□□□□ -0.48
Col8a2P25318 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC12.04□□□□□ -0.48
Col8a2P25318 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC12.04□□□□□ -0.48
Col8a2P25318 Gm7775-201ENSMUST00000218871 853 ntBASIC12.04□□□□□ -0.48
Col8a2P25318 Pim2-204ENSMUST00000223553 1113 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Lrch4-202ENSMUST00000175968 2036 ntAPPRIS ALT2 TSL 5 BASIC12.04□□□□□ -0.48
Col8a2P25318 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Atat1-203ENSMUST00000077494 1340 ntAPPRIS ALT2 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Zfp668-204ENSMUST00000106263 3132 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Col8a2P25318 Gsk3b-201ENSMUST00000023507 8303 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col8a2P25318 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Wipi2-201ENSMUST00000036872 5171 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Tle3-210ENSMUST00000161207 2592 ntTSL 5 BASIC12.03□□□□□ -0.48
Col8a2P25318 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC12.03□□□□□ -0.48
Col8a2P25318 AC162938.1-201ENSMUST00000213140 2323 ntBASIC12.03□□□□□ -0.48
Col8a2P25318 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Col8a2P25318 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Sorbs1-208ENSMUST00000224247 2688 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Col8a2P25318 Ap4b1-202ENSMUST00000076599 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Gm13453-201ENSMUST00000118708 357 ntBASIC12.03□□□□□ -0.48
Col8a2P25318 Gm6222-201ENSMUST00000120787 396 ntBASIC12.03□□□□□ -0.48
Col8a2P25318 1700060J05Rik-201ENSMUST00000138377 1060 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Gm27306-201ENSMUST00000183970 107 ntBASIC12.03□□□□□ -0.48
Col8a2P25318 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC12.03□□□□□ -0.48
Col8a2P25318 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC12.03□□□□□ -0.48
Col8a2P25318 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC12.03□□□□□ -0.48
Col8a2P25318 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC12.03□□□□□ -0.48
Col8a2P25318 Aprt-209ENSMUST00000213062 560 ntTSL 2 BASIC12.03□□□□□ -0.48
Col8a2P25318 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Dupd1-202ENSMUST00000224735 548 ntBASIC12.03□□□□□ -0.48
Col8a2P25318 AC090659.2-201ENSMUST00000225378 1186 ntBASIC12.03□□□□□ -0.48
Col8a2P25318 Aif1-201ENSMUST00000025257 847 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Col8a2P25318 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Ucn-201ENSMUST00000043475 504 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Gm2423-201ENSMUST00000074863 733 ntBASIC12.03□□□□□ -0.48
Col8a2P25318 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Vangl2-202ENSMUST00000111263 6528 ntAPPRIS P1 TSL 5 BASIC12.03□□□□□ -0.48
Col8a2P25318 Wsb1-201ENSMUST00000017821 2476 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Nop9-201ENSMUST00000019441 3694 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Col8a2P25318 Tmem97-201ENSMUST00000103242 1375 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Cyp21a2-ps-201ENSMUST00000172970 1383 ntBASIC12.03□□□□□ -0.48
Col8a2P25318 Nt5dc2-201ENSMUST00000090212 1407 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Col8a2P25318 Nupl1-207ENSMUST00000225311 2475 ntBASIC12.02□□□□□ -0.48
Col8a2P25318 Gtpbp3-201ENSMUST00000007754 2800 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col8a2P25318 Crat-202ENSMUST00000102854 2160 ntTSL 5 BASIC12.02□□□□□ -0.48
Col8a2P25318 Ccnb2-201ENSMUST00000034742 1531 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col8a2P25318 March4-201ENSMUST00000047786 4553 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Col8a2P25318 Cct6b-202ENSMUST00000100722 1871 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Col8a2P25318 Tbc1d1-203ENSMUST00000119756 4760 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Wdtc1-202ENSMUST00000105906 4057 ntTSL 5 BASIC12.02□□□□□ -0.49
Col8a2P25318 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Ccdc154-202ENSMUST00000182292 1989 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.49
Col8a2P25318 Hnrnpul1-205ENSMUST00000206832 3784 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Col8a2P25318 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms