Protein–RNA interactions for Protein: P21237

Bdnf, Brain-derived neurotrophic factor, mousemouse

Predictions only

Length 249 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BdnfP21237 Arl4a-201ENSMUST00000101472 1200 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Sec22b-202ENSMUST00000122288 1177 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Gm17114-201ENSMUST00000164716 511 ntTSL 3 BASIC13.85□□□□□ -0.19
BdnfP21237 Tmprss5-204ENSMUST00000167095 1146 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
BdnfP21237 1500015A07Rik-203ENSMUST00000184678 890 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Gm27628-201ENSMUST00000184911 107 ntBASIC13.85□□□□□ -0.19
BdnfP21237 Fuz-206ENSMUST00000207485 1140 ntAPPRIS ALT1 TSL 5 BASIC13.85□□□□□ -0.19
BdnfP21237 Cela3a-201ENSMUST00000024200 958 ntAPPRIS P1 TSL 5 BASIC13.85□□□□□ -0.19
BdnfP21237 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Ly6d-201ENSMUST00000040404 744 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Nat6-201ENSMUST00000093785 2053 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Brsk1-202ENSMUST00000120836 2867 ntTSL 5 BASIC13.85□□□□□ -0.19
BdnfP21237 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Pcdha11-202ENSMUST00000115657 5360 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Eaf1-201ENSMUST00000022446 4918 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
BdnfP21237 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC13.84□□□□□ -0.19
BdnfP21237 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
BdnfP21237 Rusc2-207ENSMUST00000131668 5093 ntTSL 5 BASIC13.84□□□□□ -0.19
BdnfP21237 Gm26513-201ENSMUST00000181802 2489 ntBASIC13.84□□□□□ -0.19
BdnfP21237 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.84□□□□□ -0.19
BdnfP21237 Arid3c-201ENSMUST00000084698 1417 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC13.84□□□□□ -0.19
BdnfP21237 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Wdr61-203ENSMUST00000121204 1290 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
BdnfP21237 Spr-ps1-202ENSMUST00000186281 706 ntTSL 2 BASIC13.84□□□□□ -0.19
BdnfP21237 4931406C07Rik-209ENSMUST00000217042 691 ntTSL 3 BASIC13.84□□□□□ -0.19
BdnfP21237 Atg101-201ENSMUST00000048393 1230 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 6030498E09Rik-201ENSMUST00000050744 1291 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Cmtm7-202ENSMUST00000084867 874 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.84□□□□□ -0.19
BdnfP21237 Magi1-208ENSMUST00000204347 7929 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Sema5b-202ENSMUST00000120756 4646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
BdnfP21237 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Ntrk2-209ENSMUST00000225950 2640 ntBASIC13.84□□□□□ -0.19
BdnfP21237 Tubb3-201ENSMUST00000071134 1868 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Gm13294-201ENSMUST00000121757 1330 ntBASIC13.84□□□□□ -0.19
BdnfP21237 1700029H14Rik-203ENSMUST00000134023 1319 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Gm5366-201ENSMUST00000215494 1338 ntBASIC13.84□□□□□ -0.19
BdnfP21237 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Sh3bp5-201ENSMUST00000091903 2684 ntAPPRIS P3 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
BdnfP21237 Pik3c2b-201ENSMUST00000077730 7928 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
BdnfP21237 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
BdnfP21237 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
BdnfP21237 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
BdnfP21237 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
BdnfP21237 Gnpda2-202ENSMUST00000120789 1594 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
BdnfP21237 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.19
BdnfP21237 Dlg5-203ENSMUST00000090398 7851 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
BdnfP21237 Tm9sf1-201ENSMUST00000002391 2382 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
BdnfP21237 Trf-201ENSMUST00000035158 2571 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
BdnfP21237 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.19
BdnfP21237 Stt3b-201ENSMUST00000035010 4221 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
BdnfP21237 Kcnk13-202ENSMUST00000160413 3061 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 P4hb-201ENSMUST00000026122 2861 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Arid3a-203ENSMUST00000105377 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Etnk2-201ENSMUST00000129213 2074 ntAPPRIS ALT2 TSL 2 BASIC13.83□□□□□ -0.2
BdnfP21237 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.83□□□□□ -0.2
BdnfP21237 Enox1-201ENSMUST00000022589 3142 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC13.83□□□□□ -0.2
BdnfP21237 Saa1-201ENSMUST00000128088 609 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Csrp3-202ENSMUST00000167786 899 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Gm25927-201ENSMUST00000175058 117 ntBASIC13.83□□□□□ -0.2
BdnfP21237 Gm9726-201ENSMUST00000180321 678 ntBASIC13.83□□□□□ -0.2
BdnfP21237 Pih1d1-206ENSMUST00000210139 1077 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC13.83□□□□□ -0.2
BdnfP21237 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.83□□□□□ -0.2
BdnfP21237 Ephx4-201ENSMUST00000049146 1279 ntAPPRIS P1 TSL 2 BASIC13.83□□□□□ -0.2
BdnfP21237 Ythdf2-201ENSMUST00000085181 955 ntTSL 2 BASIC13.83□□□□□ -0.2
BdnfP21237 Nfe2l1-204ENSMUST00000107659 2351 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Txnrd3-201ENSMUST00000000828 2836 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Rnf34-201ENSMUST00000031434 4440 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Pip5k1c-210ENSMUST00000163075 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.83□□□□□ -0.2
BdnfP21237 Slc4a7-201ENSMUST00000057015 8132 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Zscan22-204ENSMUST00000120809 1826 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Dmkn-205ENSMUST00000165887 2063 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
BdnfP21237 Kcnip1-202ENSMUST00000101368 2322 ntTSL 2 BASIC13.82□□□□□ -0.2
BdnfP21237 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC13.82□□□□□ -0.2
BdnfP21237 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
BdnfP21237 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
BdnfP21237 1700022A21Rik-202ENSMUST00000182910 1448 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
BdnfP21237 Gm43677-201ENSMUST00000198098 2378 ntBASIC13.82□□□□□ -0.2
BdnfP21237 Angptl7-201ENSMUST00000030840 2157 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 49.3 ms