Protein–RNA interactions for Protein: P12960

Cntn1, Contactin-1, mousemouse

Predictions only

Length 1,020 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cntn1P12960 Reep1-201ENSMUST00000121469 3924 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cntn1P12960 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cntn1P12960 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cntn1P12960 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cntn1P12960 Smarca5-201ENSMUST00000043359 6113 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cntn1P12960 Tmem33-204ENSMUST00000161369 6164 ntAPPRIS P3 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cntn1P12960 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cntn1P12960 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cntn1P12960 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC13.85□□□□□ -0.19
Cntn1P12960 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC13.85□□□□□ -0.19
Cntn1P12960 Farp2-201ENSMUST00000120301 3937 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Irf8-205ENSMUST00000162001 2270 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 AI467606-201ENSMUST00000056288 1932 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Kdm4b-202ENSMUST00000086835 4360 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Tmpo-202ENSMUST00000072239 3533 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 E330009J07Rik-202ENSMUST00000101492 6742 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Wdr70-201ENSMUST00000045766 2126 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Htr3a-202ENSMUST00000217289 1987 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC13.84□□□□□ -0.19
Cntn1P12960 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Kirrel-202ENSMUST00000107618 7278 ntAPPRIS P2 TSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 U2af1l4-216ENSMUST00000166510 835 ntTSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.84□□□□□ -0.19
Cntn1P12960 Gm27533-201ENSMUST00000183800 152 ntBASIC13.84□□□□□ -0.19
Cntn1P12960 AC090659.2-201ENSMUST00000225378 1186 ntBASIC13.84□□□□□ -0.19
Cntn1P12960 Dkkl1-201ENSMUST00000033057 1149 ntAPPRIS P2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Rhox9-201ENSMUST00000089062 882 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC13.84□□□□□ -0.19
Cntn1P12960 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 Cdc37l1-204ENSMUST00000224511 2944 ntAPPRIS ALT2 BASIC13.84□□□□□ -0.19
Cntn1P12960 Col7a1-201ENSMUST00000026740 9198 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 Mospd2-201ENSMUST00000004715 2015 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Dclk1-211ENSMUST00000199169 1499 ntTSL 2 BASIC13.84□□□□□ -0.19
Cntn1P12960 Ankrd10-202ENSMUST00000169782 5156 ntTSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Hsp90b1-201ENSMUST00000020238 2825 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Ap5m1-205ENSMUST00000227431 3757 ntBASIC13.84□□□□□ -0.19
Cntn1P12960 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Gemin5-202ENSMUST00000102711 4919 ntAPPRIS ALT2 TSL 5 BASIC13.84□□□□□ -0.19
Cntn1P12960 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Ubqln1-201ENSMUST00000058735 3686 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Hnrnpm-201ENSMUST00000087582 2339 ntAPPRIS ALT2 TSL 1 (best) BASIC13.84□□□□□ -0.19
Cntn1P12960 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.19
Cntn1P12960 Arhgef40-220ENSMUST00000182909 5108 ntAPPRIS P4 TSL 5 BASIC13.83□□□□□ -0.19
Cntn1P12960 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC13.83□□□□□ -0.19
Cntn1P12960 Cacng2-201ENSMUST00000019290 5510 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cntn1P12960 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC13.83□□□□□ -0.2
Cntn1P12960 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Fgfr3-203ENSMUST00000114411 4225 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cntn1P12960 Gm24543-201ENSMUST00000103867 82 ntBASIC13.83□□□□□ -0.2
Cntn1P12960 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cntn1P12960 Ppdpf-202ENSMUST00000108841 689 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Lcn6-202ENSMUST00000114197 635 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC13.83□□□□□ -0.2
Cntn1P12960 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.83□□□□□ -0.2
Cntn1P12960 Igfbp4-204ENSMUST00000140772 742 ntTSL 2 BASIC13.83□□□□□ -0.2
Cntn1P12960 Gm11615-201ENSMUST00000156205 818 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Wfdc2-201ENSMUST00000017867 849 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Cfd-201ENSMUST00000061653 922 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC13.83□□□□□ -0.2
Cntn1P12960 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.83□□□□□ -0.2
Cntn1P12960 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Gtf2h5-201ENSMUST00000039487 2245 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Ppp2r5e-205ENSMUST00000220035 3135 ntTSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Psen2-201ENSMUST00000010753 2004 ntAPPRIS P2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Iqcm-201ENSMUST00000034033 2014 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Cntn1P12960 Dhx34-203ENSMUST00000119102 4310 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Cntn1P12960 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Cntn1P12960 Gm45504-201ENSMUST00000211407 2107 ntBASIC13.82□□□□□ -0.2
Cntn1P12960 Fem1a-201ENSMUST00000060253 6816 ntAPPRIS P1 BASIC13.82□□□□□ -0.2
Cntn1P12960 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Galnt14-201ENSMUST00000024858 2990 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Gm6222-201ENSMUST00000120787 396 ntBASIC13.82□□□□□ -0.2
Cntn1P12960 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Gm11899-201ENSMUST00000142373 745 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Gm11535-201ENSMUST00000145517 778 ntTSL 3 BASIC13.82□□□□□ -0.2
Cntn1P12960 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Cntn1P12960 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.82□□□□□ -0.2
Cntn1P12960 Lsamp-207ENSMUST00000189229 637 ntTSL 3 BASIC13.82□□□□□ -0.2
Cntn1P12960 Mir124-2hg-206ENSMUST00000189754 525 ntTSL 3 BASIC13.82□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 27.6 ms