Protein–RNA interactions for Protein: P0C090

Rc3h2, Roquin-2, mousemouse

Known RBP Predictions only

Length 1,187 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rc3h2P0C090 Nell1-201ENSMUST00000081872 6617 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Sumo3-201ENSMUST00000020501 2630 ntAPPRIS P3 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Ric8b-201ENSMUST00000038523 3069 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Pld3-202ENSMUST00000117611 2297 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Lmna-203ENSMUST00000120377 2021 ntAPPRIS ALT2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Dse-201ENSMUST00000048010 4389 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 Spock1-203ENSMUST00000185905 2794 ntTSL 1 (best) BASIC14.68□□□□□ -0.06
Rc3h2P0C090 BC001981-202ENSMUST00000191393 1545 ntBASIC14.67□□□□□ -0.06
Rc3h2P0C090 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.67□□□□□ -0.06
Rc3h2P0C090 Psmc3-202ENSMUST00000067663 1636 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Klf15-202ENSMUST00000113530 2374 ntAPPRIS P1 TSL 5 BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Jakmip1-212ENSMUST00000174629 1941 ntTSL 5 BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Ccdc69-202ENSMUST00000108880 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Crip3-202ENSMUST00000113465 1035 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Crybb3-205ENSMUST00000120506 804 ntAPPRIS P1 TSL 3 BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Ift27-201ENSMUST00000016781 1012 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Gtpbp10-211ENSMUST00000198799 648 ntBASIC14.67□□□□□ -0.06
Rc3h2P0C090 AC140375.2-201ENSMUST00000225283 584 ntBASIC14.67□□□□□ -0.06
Rc3h2P0C090 AC156016.3-201ENSMUST00000228623 344 ntBASIC14.67□□□□□ -0.06
Rc3h2P0C090 Armc12-201ENSMUST00000025060 1083 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Svip-201ENSMUST00000098414 3053 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Zfp639-205ENSMUST00000193287 2211 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Barhl1-201ENSMUST00000050776 3666 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Selplg-201ENSMUST00000100874 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Pdia3-201ENSMUST00000028683 2770 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Cul3-201ENSMUST00000163119 4709 ntAPPRIS P1 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.67□□□□□ -0.06
Rc3h2P0C090 Hnf4a-201ENSMUST00000018094 4356 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 St8sia2-201ENSMUST00000026896 5368 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Rnaseh2a-203ENSMUST00000109738 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Ccdc154-201ENSMUST00000073277 2417 ntAPPRIS ALT2 TSL 5 BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Fbxo34-201ENSMUST00000043112 2937 ntAPPRIS P3 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Rlf-201ENSMUST00000056635 6242 ntAPPRIS P2 TSL 5 BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Tbc1d20-201ENSMUST00000028963 3386 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Gm10406-202ENSMUST00000170738 1955 ntAPPRIS P1 TSL 5 BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Zdhhc23-201ENSMUST00000036321 1380 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Rab4a-201ENSMUST00000117702 1080 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Cdpf1-202ENSMUST00000125947 706 ntAPPRIS P1 TSL 2 BASIC14.66□□□□□ -0.06
Rc3h2P0C090 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Rfx5-203ENSMUST00000107254 4450 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Erlec1-201ENSMUST00000073192 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Sema3b-202ENSMUST00000102529 2875 ntAPPRIS P1 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Kcnh1-202ENSMUST00000110844 7161 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Tdrd12-205ENSMUST00000205407 1412 ntTSL 5 BASIC14.66□□□□□ -0.06
Rc3h2P0C090 Sik1-201ENSMUST00000024839 4511 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Cep170b-211ENSMUST00000222711 6566 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Slc43a1-201ENSMUST00000028469 2539 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Aifm1-202ENSMUST00000114945 2221 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Gtf2h4-207ENSMUST00000160734 1569 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Abhd15-201ENSMUST00000094004 2662 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Taf1a-201ENSMUST00000097043 1472 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Cyp2a5-201ENSMUST00000005685 2013 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC14.65□□□□□ -0.06
Rc3h2P0C090 Il18r1-203ENSMUST00000167723 1919 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Apoo-203ENSMUST00000113897 1218 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Rgs20-203ENSMUST00000119256 883 ntAPPRIS ALT2 TSL 3 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Gm12212-201ENSMUST00000141032 378 ntTSL 3 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Sf3a2-204ENSMUST00000151928 781 ntTSL 5 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Pttg1ip-205ENSMUST00000162429 652 ntAPPRIS ALT2 TSL 2 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Gm6218-201ENSMUST00000219812 628 ntBASIC14.65□□□□□ -0.06
Rc3h2P0C090 Cnpy2-201ENSMUST00000026446 763 ntAPPRIS P1 TSL 5 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Nectin2-201ENSMUST00000075447 2735 ntAPPRIS P3 TSL 1 (best) BASIC14.65□□□□□ -0.06
Rc3h2P0C090 B3galt6-201ENSMUST00000052185 3184 ntAPPRIS P1 BASIC14.65□□□□□ -0.06
Rc3h2P0C090 Prrxl1-203ENSMUST00000187377 1629 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Retrieved 100 of 76,532 protein–RNA pairs in 35.4 ms