Protein–RNA interactions for Protein: P08228

Sod1, Superoxide dismutase [Cu-Zn], mousemouse

Known RBP Predictions only

Length 154 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Sod1P08228 Gm32926-202ENSMUST00000215162 1176 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Sod1P08228 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC13.46□□□□□ -0.25
Sod1P08228 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sod1P08228 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sod1P08228 Plpp4-201ENSMUST00000094018 1256 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sod1P08228 Pglyrp2-201ENSMUST00000114455 1915 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Sod1P08228 Gm9109-201ENSMUST00000120254 1405 ntBASIC13.46□□□□□ -0.26
Sod1P08228 Clec4g-201ENSMUST00000058040 1441 ntTSL 5 BASIC13.46□□□□□ -0.26
Sod1P08228 Fgfr4-201ENSMUST00000005452 3324 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sod1P08228 Ptgs1-201ENSMUST00000062069 2867 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sod1P08228 Gda-201ENSMUST00000087600 5428 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Sod1P08228 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Ppp1r18-206ENSMUST00000190496 1395 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Enah-204ENSMUST00000111030 2844 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Enah-212ENSMUST00000195059 2832 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Psmd4-203ENSMUST00000117355 1756 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC13.45□□□□□ -0.26
Sod1P08228 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC13.45□□□□□ -0.26
Sod1P08228 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Cnot7-206ENSMUST00000135269 2461 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Apba3-211ENSMUST00000220297 2268 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sod1P08228 D830030K20Rik-201ENSMUST00000112797 1695 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Trav13d-2-201ENSMUST00000103596 264 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sod1P08228 Trav13n-2-201ENSMUST00000103622 264 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sod1P08228 Rab1a-202ENSMUST00000109601 1200 ntTSL 5 BASIC13.45□□□□□ -0.26
Sod1P08228 Gm5303-201ENSMUST00000117943 1252 ntBASIC13.45□□□□□ -0.26
Sod1P08228 Med28-203ENSMUST00000119579 636 ntTSL 3 BASIC13.45□□□□□ -0.26
Sod1P08228 Mir1894-201ENSMUST00000122802 81 ntBASIC13.45□□□□□ -0.26
Sod1P08228 Ascl5-201ENSMUST00000180436 567 ntAPPRIS P1 BASIC13.45□□□□□ -0.26
Sod1P08228 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.45□□□□□ -0.26
Sod1P08228 Ttr-201ENSMUST00000075312 1219 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Obp2a-201ENSMUST00000077667 744 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Gm10244-201ENSMUST00000090237 830 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Cables1-202ENSMUST00000171109 3396 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Alx1-205ENSMUST00000218282 2012 ntAPPRIS P1 TSL 5 BASIC13.45□□□□□ -0.26
Sod1P08228 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Echdc1-202ENSMUST00000160399 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Chst10-206ENSMUST00000194361 2996 ntAPPRIS ALT2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Nploc4-201ENSMUST00000044271 4121 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.45□□□□□ -0.26
Sod1P08228 Slc35e4-202ENSMUST00000109995 3063 ntAPPRIS ALT1 TSL 5 BASIC13.45□□□□□ -0.26
Sod1P08228 Slc35e4-201ENSMUST00000051207 3059 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Foxo3-201ENSMUST00000056974 2889 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Sod1P08228 Fam234a-201ENSMUST00000114988 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Slc8a3-202ENSMUST00000085238 4927 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Tmem56-203ENSMUST00000128909 6696 ntAPPRIS P2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Gm4081-201ENSMUST00000195287 1838 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Itsn1-203ENSMUST00000095909 6103 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Mir692-1-201ENSMUST00000102263 109 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Nedd8-201ENSMUST00000010520 824 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Gm4984-201ENSMUST00000115987 360 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Gm11425-201ENSMUST00000119608 498 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Gm13385-201ENSMUST00000121089 220 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC13.44□□□□□ -0.26
Sod1P08228 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.44□□□□□ -0.26
Sod1P08228 Gm29417-201ENSMUST00000188160 571 ntTSL 5 BASIC13.44□□□□□ -0.26
Sod1P08228 AY702102-202ENSMUST00000194651 1173 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Gm43094-201ENSMUST00000196549 921 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Gm7067-201ENSMUST00000207698 1249 ntBASIC13.44□□□□□ -0.26
Sod1P08228 4930438A08Rik-202ENSMUST00000208022 918 ntTSL 5 BASIC13.44□□□□□ -0.26
Sod1P08228 Gm8463-201ENSMUST00000208573 613 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sod1P08228 Gm9899-201ENSMUST00000065519 555 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Lce3a-201ENSMUST00000067318 549 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Gm9396-201ENSMUST00000076703 567 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Iqcf4-201ENSMUST00000085111 756 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Camk2g-217ENSMUST00000226630 1937 ntBASIC13.44□□□□□ -0.26
Sod1P08228 Zfp691-204ENSMUST00000179290 1721 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Gm29358-201ENSMUST00000186510 1734 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Syt6-203ENSMUST00000118117 1856 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Pgm2l1-202ENSMUST00000084935 8834 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Acr-201ENSMUST00000023295 1504 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC13.44□□□□□ -0.26
Sod1P08228 Tcf19-203ENSMUST00000161012 1665 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Sod1P08228 Pde7b-205ENSMUST00000169404 1697 ntAPPRIS ALT2 TSL 5 BASIC13.44□□□□□ -0.26
Sod1P08228 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sod1P08228 Mbtd1-201ENSMUST00000063645 2138 ntTSL 1 (best) BASIC13.43□□□□□ -0.26
Sod1P08228 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sod1P08228 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC13.43□□□□□ -0.26
Sod1P08228 AC114008.2-201ENSMUST00000227699 1347 ntBASIC13.43□□□□□ -0.26
Sod1P08228 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sod1P08228 Sirt3-201ENSMUST00000026559 1461 ntAPPRIS P2 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sod1P08228 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sod1P08228 Pitpna-206ENSMUST00000179521 3727 ntAPPRIS ALT1 TSL 5 BASIC13.43□□□□□ -0.26
Sod1P08228 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC13.43□□□□□ -0.26
Sod1P08228 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC13.43□□□□□ -0.26
Sod1P08228 Men1-207ENSMUST00000113503 1851 ntAPPRIS ALT2 TSL 5 BASIC13.43□□□□□ -0.26
Sod1P08228 Gm11524-201ENSMUST00000119349 807 ntBASIC13.43□□□□□ -0.26
Sod1P08228 Syngr2-202ENSMUST00000120928 1402 ntTSL 2 BASIC13.43□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 35.7 ms