Protein–RNA interactions for Protein: P08226

Apoe, Apolipoprotein E, mousemouse

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ApoeP08226 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.66□□□□□ -0.22
ApoeP08226 Ap4b1-207ENSMUST00000200377 1823 ntTSL 5 BASIC13.66□□□□□ -0.22
ApoeP08226 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Fut11-201ENSMUST00000048016 4163 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Gm26559-201ENSMUST00000181939 2481 ntTSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Chd1-202ENSMUST00000024627 7916 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC13.66□□□□□ -0.22
ApoeP08226 Klhl21-201ENSMUST00000097773 3986 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Noct-203ENSMUST00000167780 2992 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
ApoeP08226 Chrm4-201ENSMUST00000045537 1440 ntAPPRIS P1 BASIC13.65□□□□□ -0.22
ApoeP08226 Mpl-201ENSMUST00000006556 2083 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Camta1-211ENSMUST00000169423 5208 ntAPPRIS P2 TSL 5 BASIC13.65□□□□□ -0.22
ApoeP08226 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Chac1-201ENSMUST00000028780 1637 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC13.65□□□□□ -0.22
ApoeP08226 Atg16l1-201ENSMUST00000027512 3130 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Gm38102-201ENSMUST00000192791 1935 ntBASIC13.65□□□□□ -0.22
ApoeP08226 Ext1-201ENSMUST00000077273 7663 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC13.65□□□□□ -0.22
ApoeP08226 Gm13418-201ENSMUST00000119097 944 ntBASIC13.65□□□□□ -0.22
ApoeP08226 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC13.65□□□□□ -0.22
ApoeP08226 Smarca5-ps-202ENSMUST00000171805 1284 ntBASIC13.65□□□□□ -0.22
ApoeP08226 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC13.65□□□□□ -0.22
ApoeP08226 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC13.65□□□□□ -0.22
ApoeP08226 Mir9-3hg-206ENSMUST00000182937 636 ntTSL 3 BASIC13.65□□□□□ -0.22
ApoeP08226 Gm18246-201ENSMUST00000221023 728 ntBASIC13.65□□□□□ -0.22
ApoeP08226 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Ppib-201ENSMUST00000034947 892 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Lce3f-201ENSMUST00000090863 611 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Snupn-201ENSMUST00000068856 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Suv39h1-203ENSMUST00000115638 3116 ntAPPRIS P1 TSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC13.65□□□□□ -0.22
ApoeP08226 Gtf2ird1-205ENSMUST00000100654 3156 ntTSL 1 (best) BASIC13.65□□□□□ -0.23
ApoeP08226 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 AC131743.5-201ENSMUST00000220775 1618 ntBASIC13.64□□□□□ -0.23
ApoeP08226 4731419I09Rik-201ENSMUST00000180791 2820 ntTSL 2 BASIC13.64□□□□□ -0.23
ApoeP08226 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.64□□□□□ -0.23
ApoeP08226 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC13.64□□□□□ -0.23
ApoeP08226 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.64□□□□□ -0.23
ApoeP08226 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Gm26688-201ENSMUST00000181176 1568 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ApoeP08226 Best4-ps-201ENSMUST00000129783 1380 ntBASIC13.64□□□□□ -0.23
ApoeP08226 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC13.64□□□□□ -0.23
ApoeP08226 Map2k3os-201ENSMUST00000123544 1291 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.64□□□□□ -0.23
ApoeP08226 Ramp2-204ENSMUST00000129680 1178 ntAPPRIS P2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Psmc4-206ENSMUST00000140053 1244 ntTSL 5 BASIC13.64□□□□□ -0.23
ApoeP08226 Gng2-202ENSMUST00000159028 458 ntAPPRIS P1 TSL 2 BASIC13.64□□□□□ -0.23
ApoeP08226 4930556N13Rik-201ENSMUST00000173677 1034 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 9530052E02Rik-201ENSMUST00000180750 949 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 4930458A03Rik-201ENSMUST00000198197 961 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Krt10-202ENSMUST00000211768 557 ntTSL 3 BASIC13.64□□□□□ -0.23
ApoeP08226 Atp5l-201ENSMUST00000043675 544 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Zfp524-201ENSMUST00000086349 1142 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Npw-201ENSMUST00000095544 638 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Angel2-202ENSMUST00000066632 3714 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Opa1-206ENSMUST00000160597 6230 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Gm26546-201ENSMUST00000181000 4276 ntTSL 5 BASIC13.64□□□□□ -0.23
ApoeP08226 Ptbp3-205ENSMUST00000148331 2016 ntAPPRIS ALT2 TSL 5 BASIC13.64□□□□□ -0.23
ApoeP08226 Peli3-202ENSMUST00000120475 2988 ntTSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Clec16a-211ENSMUST00000155633 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Pde8a-201ENSMUST00000026672 3802 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Lipe-202ENSMUST00000054301 2661 ntAPPRIS ALT2 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 Tmem241-205ENSMUST00000209859 1426 ntAPPRIS P4 TSL 1 (best) BASIC13.64□□□□□ -0.23
ApoeP08226 AC119177.1-201ENSMUST00000227647 1332 ntBASIC13.64□□□□□ -0.23
ApoeP08226 Gm6198-201ENSMUST00000191337 2929 ntBASIC13.63□□□□□ -0.23
ApoeP08226 Ak1-202ENSMUST00000113277 2063 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Nid2-201ENSMUST00000022340 4876 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.63□□□□□ -0.23
ApoeP08226 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Pcdhga12-201ENSMUST00000044851 5080 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 B3gnt8-201ENSMUST00000076034 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Syt10-201ENSMUST00000029441 1845 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Nav1-207ENSMUST00000190298 8557 ntAPPRIS ALT2 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Gm11764-201ENSMUST00000120221 623 ntBASIC13.63□□□□□ -0.23
ApoeP08226 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC13.63□□□□□ -0.23
ApoeP08226 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Lat-206ENSMUST00000206793 1215 ntAPPRIS ALT2 TSL 5 BASIC13.63□□□□□ -0.23
ApoeP08226 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC13.63□□□□□ -0.23
ApoeP08226 Prss29-201ENSMUST00000024993 1178 ntAPPRIS P1 TSL 1 (best) BASIC13.63□□□□□ -0.23
Retrieved 100 of 76,532 protein–RNA pairs in 42.2 ms