Protein–RNA interactions for Protein: P08122

Col4a2, Collagen alpha-2(IV) chain, mousemouse

Predictions only

Length 1,707 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col4a2P08122 Ywhag-205ENSMUST00000198270 1610 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col4a2P08122 Gm6983-201ENSMUST00000214912 628 ntBASIC13.19□□□□□ -0.3
Col4a2P08122 AC165254.1-201ENSMUST00000220736 599 ntTSL 5 BASIC13.19□□□□□ -0.3
Col4a2P08122 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.19□□□□□ -0.3
Col4a2P08122 Bnc1-201ENSMUST00000026096 4646 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Duoxa1-201ENSMUST00000028653 1026 ntAPPRIS P1 TSL 3 BASIC13.19□□□□□ -0.3
Col4a2P08122 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Gm8399-201ENSMUST00000082300 1117 ntBASIC13.19□□□□□ -0.3
Col4a2P08122 Iffo1-201ENSMUST00000117675 2833 ntAPPRIS P4 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Nupl1-207ENSMUST00000225311 2475 ntBASIC13.19□□□□□ -0.3
Col4a2P08122 Ushbp1-201ENSMUST00000049184 2438 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.19□□□□□ -0.3
Col4a2P08122 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Fgfr2-211ENSMUST00000120187 4311 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC13.19□□□□□ -0.3
Col4a2P08122 Fzd10-201ENSMUST00000117102 3250 ntAPPRIS P1 BASIC13.19□□□□□ -0.3
Col4a2P08122 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC13.19□□□□□ -0.3
Col4a2P08122 Zbtb25-205ENSMUST00000176509 1591 ntTSL 2 BASIC13.19□□□□□ -0.3
Col4a2P08122 Ptp4a1-202ENSMUST00000076587 2851 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Hoxa3-201ENSMUST00000114434 2591 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 1700049J03Rik-201ENSMUST00000011196 421 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 1700127F24Rik-201ENSMUST00000221685 604 ntBASIC13.19□□□□□ -0.3
Col4a2P08122 Tex26-201ENSMUST00000031667 1137 ntAPPRIS ALT2 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 A330074K22Rik-201ENSMUST00000183235 2489 ntTSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Map3k7-202ENSMUST00000080933 5669 ntAPPRIS P3 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Dhx16-201ENSMUST00000025292 3351 ntAPPRIS P1 TSL 1 (best) BASIC13.19□□□□□ -0.3
Col4a2P08122 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col4a2P08122 Crmp1-202ENSMUST00000114158 3051 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Tmem132b-201ENSMUST00000031446 7995 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col4a2P08122 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Gnpda2-201ENSMUST00000031117 1894 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Ahr-202ENSMUST00000116436 5548 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Sptlc1-201ENSMUST00000021920 2606 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Mocs1-201ENSMUST00000024797 2646 ntTSL 5 BASIC13.18□□□□□ -0.3
Col4a2P08122 Atp2c1-204ENSMUST00000112558 5642 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC13.18□□□□□ -0.3
Col4a2P08122 Crem-201ENSMUST00000025069 2931 ntTSL 5 BASIC13.18□□□□□ -0.3
Col4a2P08122 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Ust-201ENSMUST00000061601 4228 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.18□□□□□ -0.3
Col4a2P08122 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC13.18□□□□□ -0.3
Col4a2P08122 Ifnar2-202ENSMUST00000089042 2580 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Cep295nl-201ENSMUST00000103024 1944 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Gm27206-201ENSMUST00000154038 979 ntTSL 5 BASIC13.18□□□□□ -0.3
Col4a2P08122 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC13.18□□□□□ -0.3
Col4a2P08122 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.18□□□□□ -0.3
Col4a2P08122 Gm7287-201ENSMUST00000205267 602 ntBASIC13.18□□□□□ -0.3
Col4a2P08122 Gm8598-201ENSMUST00000221184 836 ntBASIC13.18□□□□□ -0.3
Col4a2P08122 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Txn1-201ENSMUST00000030051 1051 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Col4a2P08122 Ccdc33-202ENSMUST00000098681 1093 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Exoc3l-201ENSMUST00000057855 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC13.18□□□□□ -0.3
Col4a2P08122 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Art3-208ENSMUST00000121096 1600 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Tgif2-201ENSMUST00000073352 2690 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Col4a2P08122 Hmbs-202ENSMUST00000097558 1534 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Gm15850-201ENSMUST00000134998 2049 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Gls-204ENSMUST00000114513 4966 ntAPPRIS P3 TSL 5 BASIC13.17□□□□□ -0.3
Col4a2P08122 Acss3-201ENSMUST00000044668 2494 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Smarca4-201ENSMUST00000034707 6354 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Dsg2-202ENSMUST00000120102 3590 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Gm15198-201ENSMUST00000117283 177 ntBASIC13.17□□□□□ -0.3
Col4a2P08122 Gm11814-201ENSMUST00000119515 929 ntBASIC13.17□□□□□ -0.3
Col4a2P08122 Spcs2-ps-201ENSMUST00000122326 682 ntBASIC13.17□□□□□ -0.3
Col4a2P08122 Gm11684-201ENSMUST00000144975 757 ntTSL 5 BASIC13.17□□□□□ -0.3
Col4a2P08122 Carmn-202ENSMUST00000182244 988 ntTSL 2 BASIC13.17□□□□□ -0.3
Col4a2P08122 Gm29152-201ENSMUST00000189284 325 ntTSL 5 BASIC13.17□□□□□ -0.3
Col4a2P08122 Gm42693-201ENSMUST00000196779 631 ntBASIC13.17□□□□□ -0.3
Col4a2P08122 Gm9728-201ENSMUST00000200197 1055 ntBASIC13.17□□□□□ -0.3
Col4a2P08122 Gm33460-201ENSMUST00000212286 536 ntTSL 5 BASIC13.17□□□□□ -0.3
Col4a2P08122 Spata33-205ENSMUST00000212523 486 ntTSL 3 BASIC13.17□□□□□ -0.3
Col4a2P08122 Gm9257-201ENSMUST00000221254 232 ntBASIC13.17□□□□□ -0.3
Col4a2P08122 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Isg20-201ENSMUST00000038142 1083 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Purb-201ENSMUST00000179343 8319 ntAPPRIS P1 BASIC13.17□□□□□ -0.3
Col4a2P08122 Pygo2-201ENSMUST00000060061 3198 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC13.17□□□□□ -0.3
Col4a2P08122 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 4932422M17Rik-201ENSMUST00000195992 2639 ntBASIC13.17□□□□□ -0.3
Col4a2P08122 Satb1-211ENSMUST00000152830 5993 ntAPPRIS P2 TSL 2 BASIC13.17□□□□□ -0.3
Col4a2P08122 Baiap2-204ENSMUST00000106231 4005 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Egfem1-201ENSMUST00000118531 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Col4a2P08122 Gpc5-201ENSMUST00000022707 1719 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms