Protein–RNA interactions for Protein: P06798

Hoxa4, Homeobox protein Hox-A4, mousemouse

Predictions only

Length 285 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hoxa4P06798 Gm10010-201ENSMUST00000071101 2346 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC14.17□□□□□ -0.14
Hoxa4P06798 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Tmem33-206ENSMUST00000162543 664 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Naxd-205ENSMUST00000178721 1108 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Mir7023-201ENSMUST00000185093 64 ntBASIC14.17□□□□□ -0.14
Hoxa4P06798 Gm44344-201ENSMUST00000200287 129 ntBASIC14.17□□□□□ -0.14
Hoxa4P06798 4930593C16Rik-202ENSMUST00000214011 714 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 AC121804.3-201ENSMUST00000223420 295 ntBASIC14.17□□□□□ -0.14
Hoxa4P06798 Pecr-201ENSMUST00000027381 1186 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Tex12-201ENSMUST00000034568 895 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Haus1-201ENSMUST00000048192 1004 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Zfp668-201ENSMUST00000054415 5768 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Cux1-212ENSMUST00000176778 5520 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Hsd3b7-203ENSMUST00000106272 1725 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Ubl4b-201ENSMUST00000052853 1387 ntAPPRIS P1 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Gm40765-201ENSMUST00000218612 1469 ntTSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Rnf25-201ENSMUST00000027357 1479 ntAPPRIS P3 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 B3gnt7-201ENSMUST00000113306 2582 ntAPPRIS P1 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Adam11-201ENSMUST00000068150 5102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Kctd14-205ENSMUST00000206279 2203 ntAPPRIS ALT2 TSL 2 BASIC14.17□□□□□ -0.14
Hoxa4P06798 Cadm2-203ENSMUST00000120898 2768 ntTSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC14.17□□□□□ -0.14
Hoxa4P06798 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Mdm1-208ENSMUST00000219087 1318 ntTSL 2 BASIC14.16□□□□□ -0.14
Hoxa4P06798 Klk7-201ENSMUST00000032955 1895 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxa4P06798 Ppp2r1a-201ENSMUST00000007708 2410 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Rogdi-201ENSMUST00000023191 1431 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Dnajc1-209ENSMUST00000166495 5497 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Twf2-204ENSMUST00000188650 1508 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Nfyb-204ENSMUST00000130911 2554 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Mir1897-201ENSMUST00000122581 272 ntBASIC14.16□□□□□ -0.14
Hoxa4P06798 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Nup188-205ENSMUST00000138666 534 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Mocs2-207ENSMUST00000166104 1193 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Gm26839-201ENSMUST00000180686 842 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC14.16□□□□□ -0.14
Hoxa4P06798 Gm17837-201ENSMUST00000186435 985 ntBASIC14.16□□□□□ -0.14
Hoxa4P06798 Gm37117-201ENSMUST00000194238 589 ntTSL 5 BASIC14.16□□□□□ -0.14
Hoxa4P06798 Prr23a2-201ENSMUST00000071302 881 ntAPPRIS P1 BASIC14.16□□□□□ -0.14
Hoxa4P06798 Zswim7-201ENSMUST00000072916 732 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Pde3b-201ENSMUST00000032909 6573 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Serhl-201ENSMUST00000078218 1371 ntAPPRIS P2 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Pdlim3-203ENSMUST00000210422 1479 ntAPPRIS ALT1 TSL 5 BASIC14.16□□□□□ -0.14
Hoxa4P06798 Slc12a5-207ENSMUST00000202223 5690 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Uvrag-201ENSMUST00000037968 5157 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Csad-201ENSMUST00000023805 2265 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Rbm15-201ENSMUST00000061772 4343 ntAPPRIS P1 TSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Hnf1b-203ENSMUST00000108114 2659 ntTSL 1 (best) BASIC14.16□□□□□ -0.14
Hoxa4P06798 Dnaja1-210ENSMUST00000164233 5622 ntAPPRIS P1 TSL 5 BASIC14.16□□□□□ -0.14
Hoxa4P06798 Stk33-203ENSMUST00000121378 1304 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Zdhhc19-201ENSMUST00000064192 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Nsmce3-201ENSMUST00000094331 5946 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxa4P06798 Disc1-207ENSMUST00000121953 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxa4P06798 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Gm8334-201ENSMUST00000112755 1662 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxa4P06798 Palb2-201ENSMUST00000063587 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Nt5c3b-201ENSMUST00000092688 1399 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.15□□□□□ -0.14
Hoxa4P06798 1700007J10Rik-202ENSMUST00000153431 1111 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Hist1h3h-201ENSMUST00000188775 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxa4P06798 Hist1h3i-201ENSMUST00000189457 411 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxa4P06798 Gm38294-201ENSMUST00000192831 381 ntBASIC14.15□□□□□ -0.14
Hoxa4P06798 Gm9063-201ENSMUST00000223299 582 ntBASIC14.15□□□□□ -0.14
Hoxa4P06798 Gstp2-201ENSMUST00000042700 770 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Rnf113a1-201ENSMUST00000046433 1223 ntAPPRIS P1 BASIC14.15□□□□□ -0.14
Hoxa4P06798 Wnk1-202ENSMUST00000060043 10575 ntAPPRIS P3 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Tmtc2-201ENSMUST00000061506 5629 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Maged2-201ENSMUST00000026302 2207 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxa4P06798 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC14.15□□□□□ -0.14
Hoxa4P06798 Traf3ip1-201ENSMUST00000047242 3474 ntAPPRIS P2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Rspry1-202ENSMUST00000121101 3092 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Wbp2-201ENSMUST00000074628 1826 ntAPPRIS P1 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Chtop-206ENSMUST00000107344 2972 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Ank1-208ENSMUST00000121075 1740 ntTSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.15□□□□□ -0.14
Hoxa4P06798 Gm6159-201ENSMUST00000191249 1724 ntBASIC14.15□□□□□ -0.14
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms