Protein–RNA interactions for Protein: P01139

Ngf, Beta-nerve growth factor, mousemouse

Predictions only

Length 241 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NgfP01139 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC12.68□□□□□ -0.38
NgfP01139 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.68□□□□□ -0.38
NgfP01139 Gm17795-201ENSMUST00000214505 757 ntBASIC12.68□□□□□ -0.38
NgfP01139 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC12.68□□□□□ -0.38
NgfP01139 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NgfP01139 Gm25857-201ENSMUST00000082788 129 ntBASIC12.68□□□□□ -0.38
NgfP01139 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC12.68□□□□□ -0.38
NgfP01139 Gm13034-201ENSMUST00000121342 3177 ntBASIC12.68□□□□□ -0.38
NgfP01139 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NgfP01139 Rnf26-208ENSMUST00000185479 2964 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NgfP01139 Tmem57-201ENSMUST00000030628 3826 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NgfP01139 Pi4k2a-201ENSMUST00000066778 3771 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NgfP01139 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
NgfP01139 Sumo3-202ENSMUST00000099538 1874 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
NgfP01139 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.68□□□□□ -0.38
NgfP01139 Stat3-207ENSMUST00000138438 2506 ntTSL 5 BASIC12.67□□□□□ -0.38
NgfP01139 Fbxl18-201ENSMUST00000035985 2831 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Foxg1-204ENSMUST00000179669 3973 ntAPPRIS P1 BASIC12.67□□□□□ -0.38
NgfP01139 Mrc2-202ENSMUST00000100335 5795 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Rab6a-202ENSMUST00000098252 3110 ntAPPRIS ALT1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Tle3-218ENSMUST00000178113 5205 ntTSL 5 BASIC12.67□□□□□ -0.38
NgfP01139 Pcsk5-201ENSMUST00000025618 6675 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NgfP01139 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC12.67□□□□□ -0.38
NgfP01139 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.67□□□□□ -0.38
NgfP01139 Stk19-ps1-201ENSMUST00000174597 517 ntBASIC12.67□□□□□ -0.38
NgfP01139 Gm8602-201ENSMUST00000184045 607 ntBASIC12.67□□□□□ -0.38
NgfP01139 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
NgfP01139 AC162801.1-201ENSMUST00000220612 198 ntBASIC12.67□□□□□ -0.38
NgfP01139 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.67□□□□□ -0.38
NgfP01139 AC155729.1-201ENSMUST00000227758 544 ntBASIC12.67□□□□□ -0.38
NgfP01139 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
NgfP01139 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Mpl-203ENSMUST00000106375 1701 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Tinf2-205ENSMUST00000227842 2001 ntAPPRIS ALT2 BASIC12.67□□□□□ -0.38
NgfP01139 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Dtx2-204ENSMUST00000111145 2493 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Slc35f4-205ENSMUST00000146164 2480 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Zswim4-201ENSMUST00000039480 4625 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Gm14451-201ENSMUST00000121581 1542 ntBASIC12.67□□□□□ -0.38
NgfP01139 Gm42690-201ENSMUST00000197921 1836 ntBASIC12.67□□□□□ -0.38
NgfP01139 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
NgfP01139 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Whrn-203ENSMUST00000084510 4049 ntAPPRIS P4 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Spidr-201ENSMUST00000040248 3279 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Zpr1-206ENSMUST00000156440 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Slc24a3-201ENSMUST00000081121 1788 ntAPPRIS P2 TSL 5 BASIC12.66□□□□□ -0.38
NgfP01139 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Msl2-201ENSMUST00000085177 4889 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 AC154527.2-201ENSMUST00000225256 1466 ntBASIC12.66□□□□□ -0.38
NgfP01139 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Arhgef10l-203ENSMUST00000097820 4382 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Prss41-204ENSMUST00000151797 1743 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Pid1-204ENSMUST00000176559 1564 ntTSL 2 BASIC12.66□□□□□ -0.38
NgfP01139 Soga3-201ENSMUST00000092629 4105 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NgfP01139 Rarb-201ENSMUST00000063750 3108 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NgfP01139 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC12.66□□□□□ -0.38
NgfP01139 Chchd7-207ENSMUST00000121210 548 ntTSL 2 BASIC12.66□□□□□ -0.38
NgfP01139 Gm16194-204ENSMUST00000141797 475 ntTSL 3 BASIC12.66□□□□□ -0.38
NgfP01139 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Arf5-202ENSMUST00000169841 768 ntAPPRIS P1 TSL 5 BASIC12.66□□□□□ -0.38
NgfP01139 Gm28911-201ENSMUST00000188837 117 ntBASIC12.66□□□□□ -0.38
NgfP01139 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC12.66□□□□□ -0.38
NgfP01139 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC12.66□□□□□ -0.38
NgfP01139 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC12.66□□□□□ -0.38
NgfP01139 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.66□□□□□ -0.38
NgfP01139 AC139350.3-201ENSMUST00000226151 420 ntBASIC12.66□□□□□ -0.38
NgfP01139 Samhd1-202ENSMUST00000088523 1996 ntAPPRIS ALT2 TSL 5 BASIC12.66□□□□□ -0.38
NgfP01139 Gm13589-201ENSMUST00000146404 1675 ntTSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Pip4k2a-201ENSMUST00000006912 3477 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Tmx4-203ENSMUST00000110120 2602 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Errfi1-201ENSMUST00000030811 3043 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Rps3-201ENSMUST00000032998 1908 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Dmrtc1c1-201ENSMUST00000118218 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Dmrtc1c2-203ENSMUST00000120314 1611 ntAPPRIS P3 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Elf2-201ENSMUST00000062009 3353 ntAPPRIS ALT2 TSL 1 (best) BASIC12.66□□□□□ -0.38
NgfP01139 Ankrd13a-201ENSMUST00000102578 3717 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
NgfP01139 Gm26534-201ENSMUST00000181687 1724 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NgfP01139 Xpo6-201ENSMUST00000009344 4455 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
NgfP01139 Pi4k2b-202ENSMUST00000031082 3034 ntAPPRIS ALT2 TSL 2 BASIC12.65□□□□□ -0.38
NgfP01139 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
NgfP01139 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NgfP01139 4930473A02Rik-202ENSMUST00000136793 1409 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
NgfP01139 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
NgfP01139 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Retrieved 100 of 76,532 protein–RNA pairs in 44.6 ms