Protein–RNA interactions for Protein: O88705

Hcn3, Potassium/sodium hyperpolarization-activated cyclic nucleotide-gated channel 3, mousemouse

Predictions only

Length 779 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hcn3O88705 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn3O88705 Kdm5c-202ENSMUST00000112584 5900 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hcn3O88705 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn3O88705 Fgfr2-207ENSMUST00000117872 4223 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn3O88705 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.83□□□□□ -0.2
Hcn3O88705 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn3O88705 Fgf9-201ENSMUST00000022545 1593 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn3O88705 Ttc9c-201ENSMUST00000088092 1585 ntAPPRIS P1 TSL 1 (best) BASIC13.83□□□□□ -0.2
Hcn3O88705 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC13.82□□□□□ -0.2
Hcn3O88705 Atat1-202ENSMUST00000061052 1452 ntAPPRIS ALT2 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hcn3O88705 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC13.82□□□□□ -0.2
Hcn3O88705 Gm15655-201ENSMUST00000134649 440 ntTSL 2 BASIC13.82□□□□□ -0.2
Hcn3O88705 9330162012Rik-201ENSMUST00000154919 3836 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Gm10499-201ENSMUST00000174094 934 ntBASIC13.82□□□□□ -0.2
Hcn3O88705 Gm21887-202ENSMUST00000179760 483 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hcn3O88705 1700017L05Rik-201ENSMUST00000201654 558 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Abhd18-206ENSMUST00000203650 797 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn3O88705 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Nacad-201ENSMUST00000045713 4892 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Gm42688-201ENSMUST00000101253 3628 ntAPPRIS P1 TSL 5 BASIC13.82□□□□□ -0.2
Hcn3O88705 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC13.82□□□□□ -0.2
Hcn3O88705 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Srr-204ENSMUST00000121738 3183 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn3O88705 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC13.82□□□□□ -0.2
Hcn3O88705 Sf3a1-201ENSMUST00000002198 4920 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.82□□□□□ -0.2
Hcn3O88705 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC13.82□□□□□ -0.2
Hcn3O88705 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Snx22-201ENSMUST00000044711 2543 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 Slc37a1-201ENSMUST00000165149 3354 ntAPPRIS P1 TSL 1 (best) BASIC13.82□□□□□ -0.2
Hcn3O88705 AC153366.2-201ENSMUST00000219461 1984 ntBASIC13.82□□□□□ -0.2
Hcn3O88705 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hcn3O88705 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC13.81□□□□□ -0.2
Hcn3O88705 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Gm25990-201ENSMUST00000102440 86 ntBASIC13.81□□□□□ -0.2
Hcn3O88705 Pgam1-ps1-201ENSMUST00000119107 749 ntBASIC13.81□□□□□ -0.2
Hcn3O88705 Dgcr6-208ENSMUST00000153123 920 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 1700023H06Rik-201ENSMUST00000161006 1044 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC13.81□□□□□ -0.2
Hcn3O88705 AC164629.2-201ENSMUST00000217916 270 ntBASIC13.81□□□□□ -0.2
Hcn3O88705 AC154757.1-201ENSMUST00000228289 336 ntBASIC13.81□□□□□ -0.2
Hcn3O88705 Rgp1-201ENSMUST00000030190 1292 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Tjap1-202ENSMUST00000164342 2559 ntAPPRIS P2 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Grk6-205ENSMUST00000224653 2976 ntBASIC13.81□□□□□ -0.2
Hcn3O88705 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Fancm-201ENSMUST00000058889 7775 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Slc25a15-201ENSMUST00000033871 3430 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Iqgap1-201ENSMUST00000167377 7444 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.81□□□□□ -0.2
Hcn3O88705 Casz1-202ENSMUST00000122222 7926 ntAPPRIS P1 TSL 5 BASIC13.81□□□□□ -0.2
Hcn3O88705 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC13.81□□□□□ -0.2
Hcn3O88705 Cul7-201ENSMUST00000043464 5530 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Scamp3-203ENSMUST00000120697 1475 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC13.8□□□□□ -0.2
Hcn3O88705 Cacna2d2-204ENSMUST00000166799 3474 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hcn3O88705 Cbl-206ENSMUST00000206147 3452 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hcn3O88705 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Hykk-201ENSMUST00000039742 5110 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Lag3-201ENSMUST00000032217 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Itga3-201ENSMUST00000001548 4861 ntAPPRIS P3 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Cep97-202ENSMUST00000117468 2887 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Narfl-204ENSMUST00000134108 2062 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Park7-203ENSMUST00000105674 937 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hcn3O88705 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC13.8□□□□□ -0.2
Hcn3O88705 Gm7862-201ENSMUST00000121461 292 ntBASIC13.8□□□□□ -0.2
Hcn3O88705 Tpi-rs2-201ENSMUST00000182471 756 ntBASIC13.8□□□□□ -0.2
Hcn3O88705 6430573P05Rik-202ENSMUST00000192648 597 ntTSL 3 BASIC13.8□□□□□ -0.2
Hcn3O88705 Krtcap3-208ENSMUST00000201937 889 ntAPPRIS P1 TSL 5 BASIC13.8□□□□□ -0.2
Hcn3O88705 Gzmm-201ENSMUST00000020549 1287 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 2210406O10Rik-201ENSMUST00000044964 937 ntTSL 5 BASIC13.8□□□□□ -0.2
Hcn3O88705 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Mrgpra9-201ENSMUST00000098436 1049 ntAPPRIS ALT2 TSL 5 BASIC13.8□□□□□ -0.2
Hcn3O88705 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Ddhd1-202ENSMUST00000087320 9820 ntAPPRIS ALT2 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Hcn3O88705 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC13.8□□□□□ -0.2
Retrieved 100 of 76,532 protein–RNA pairs in 58.5 ms