Protein–RNA interactions for Protein: O88384

Vti1b, Vesicle transport through interaction with t-SNAREs homolog 1B, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vti1bO88384 Yipf6-201ENSMUST00000054697 5211 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC13.78□□□□□ -0.2
Vti1bO88384 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Lyrm1-203ENSMUST00000106517 1279 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Olfr1564-201ENSMUST00000112162 1091 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Vti1bO88384 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.78□□□□□ -0.2
Vti1bO88384 Josd2-202ENSMUST00000117324 858 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Tpm3-205ENSMUST00000121503 1139 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.78□□□□□ -0.2
Vti1bO88384 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 1110038F14Rik-201ENSMUST00000071792 1010 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Pomgnt1-202ENSMUST00000106496 2613 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Epha1-203ENSMUST00000204357 2948 ntTSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Loxl2-202ENSMUST00000100420 3042 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Asb10-203ENSMUST00000119657 1536 ntTSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Cdk11b-203ENSMUST00000105600 3170 ntAPPRIS P3 TSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Mllt10-203ENSMUST00000114671 5063 ntTSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Mief1-201ENSMUST00000023048 5081 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC13.78□□□□□ -0.2
Vti1bO88384 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Adrb3-203ENSMUST00000121838 1864 ntAPPRIS P2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Irf1-201ENSMUST00000019043 2069 ntAPPRIS P3 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Nr2f2-201ENSMUST00000032768 4222 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC13.78□□□□□ -0.2
Vti1bO88384 Otop2-201ENSMUST00000055490 2335 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Ociad2-204ENSMUST00000200830 2384 ntTSL 3 BASIC13.78□□□□□ -0.2
Vti1bO88384 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.78□□□□□ -0.2
Vti1bO88384 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC13.77□□□□□ -0.2
Vti1bO88384 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vti1bO88384 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vti1bO88384 Arid1b-202ENSMUST00000115797 11325 ntAPPRIS P2 TSL 5 BASIC13.77□□□□□ -0.2
Vti1bO88384 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vti1bO88384 Cyfip1-201ENSMUST00000032629 6440 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.2
Vti1bO88384 Aen-201ENSMUST00000107421 2007 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Kdm5c-203ENSMUST00000112588 6449 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.77□□□□□ -0.21
Vti1bO88384 Trmt1-205ENSMUST00000125370 2114 ntAPPRIS ALT2 TSL 5 BASIC13.77□□□□□ -0.21
Vti1bO88384 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC13.77□□□□□ -0.21
Vti1bO88384 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Rnf122-205ENSMUST00000217278 1726 ntAPPRIS ALT1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Pycr1-201ENSMUST00000026133 1861 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Cyb5r1-201ENSMUST00000027726 1837 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Commd5-201ENSMUST00000068407 1037 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Cfap45-201ENSMUST00000085894 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Sall3-201ENSMUST00000057950 6886 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Safb2-201ENSMUST00000075510 3277 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC13.77□□□□□ -0.21
Vti1bO88384 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Elmod1-201ENSMUST00000048409 2605 ntAPPRIS P2 TSL 1 (best) BASIC13.77□□□□□ -0.21
Vti1bO88384 Lysmd3-201ENSMUST00000049055 2338 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Tpm3-201ENSMUST00000029549 2230 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 4930429H19Rik-201ENSMUST00000205260 1818 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Mael-202ENSMUST00000194057 1691 ntTSL 5 BASIC13.76□□□□□ -0.21
Vti1bO88384 Gm21009-201ENSMUST00000197169 1669 ntBASIC13.76□□□□□ -0.21
Vti1bO88384 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Mob1a-202ENSMUST00000055261 4412 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Ndufab1-203ENSMUST00000123296 1416 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Arhgap28-201ENSMUST00000024840 5322 ntAPPRIS P2 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Elp6-205ENSMUST00000199592 1304 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Gm13375-201ENSMUST00000126967 854 ntTSL 2 BASIC13.76□□□□□ -0.21
Vti1bO88384 Ankrd65-202ENSMUST00000165000 1140 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vti1bO88384 Sardhos-201ENSMUST00000170435 265 ntTSL 3 BASIC13.76□□□□□ -0.21
Vti1bO88384 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.76□□□□□ -0.21
Vti1bO88384 1810026B05Rik-205ENSMUST00000184855 409 ntTSL 3 BASIC13.76□□□□□ -0.21
Vti1bO88384 Tma7-203ENSMUST00000192801 386 ntTSL 3 BASIC13.76□□□□□ -0.21
Vti1bO88384 AW822252-206ENSMUST00000208904 237 ntBASIC13.76□□□□□ -0.21
Vti1bO88384 Ndufb7-201ENSMUST00000036996 623 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Ints8-203ENSMUST00000108319 3220 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vti1bO88384 Amhr2-201ENSMUST00000023809 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC13.76□□□□□ -0.21
Vti1bO88384 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 AC166574.6-201ENSMUST00000227889 1806 ntBASIC13.76□□□□□ -0.21
Vti1bO88384 Gm21981-201ENSMUST00000143789 2721 ntAPPRIS P1 TSL 5 BASIC13.76□□□□□ -0.21
Vti1bO88384 Irgc1-201ENSMUST00000080594 1737 ntAPPRIS P1 TSL 1 (best) BASIC13.76□□□□□ -0.21
Vti1bO88384 Sirt4-202ENSMUST00000112067 1645 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Celf1-202ENSMUST00000068726 7851 ntTSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Grm7-201ENSMUST00000071076 3127 ntAPPRIS ALT1 TSL 5 BASIC13.75□□□□□ -0.21
Vti1bO88384 Fktn-204ENSMUST00000221657 6241 ntTSL 5 BASIC13.75□□□□□ -0.21
Vti1bO88384 Slc25a19-201ENSMUST00000021089 2307 ntAPPRIS P1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC13.75□□□□□ -0.21
Vti1bO88384 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC13.75□□□□□ -0.21
Vti1bO88384 Setd1b-206ENSMUST00000174836 7515 ntAPPRIS ALT2 TSL 5 BASIC13.75□□□□□ -0.21
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms