Protein–RNA interactions for Protein: O55203

Ldb2, LIM domain-binding protein 2, mousemouse

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ldb2O55203 Tmed1-201ENSMUST00000034698 1378 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Psma3-202ENSMUST00000160027 2846 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Vps53-201ENSMUST00000056601 2833 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 Gm3002-201ENSMUST00000170480 1955 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 Gm3005-202ENSMUST00000178728 1955 ntAPPRIS P1 TSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Mmab-202ENSMUST00000112245 644 ntTSL 3 BASIC14.35□□□□□ -0.11
Ldb2O55203 4930544D05Rik-203ENSMUST00000144960 624 ntAPPRIS P2 TSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC14.35□□□□□ -0.11
Ldb2O55203 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC14.35□□□□□ -0.11
Ldb2O55203 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14.35□□□□□ -0.11
Ldb2O55203 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC14.35□□□□□ -0.11
Ldb2O55203 AC151286.1-201ENSMUST00000198489 145 ntBASIC14.35□□□□□ -0.11
Ldb2O55203 Gm43125-201ENSMUST00000201724 730 ntBASIC14.35□□□□□ -0.11
Ldb2O55203 Nmur1-202ENSMUST00000212058 1287 ntAPPRIS P3 TSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC14.35□□□□□ -0.11
Ldb2O55203 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.35□□□□□ -0.11
Ldb2O55203 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Gm6471-201ENSMUST00000097935 805 ntTSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Tdrp-201ENSMUST00000062613 2463 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Krit1-211ENSMUST00000200386 2343 ntTSL 5 BASIC14.35□□□□□ -0.11
Ldb2O55203 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC14.35□□□□□ -0.11
Ldb2O55203 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Susd6-201ENSMUST00000068519 4977 ntAPPRIS P2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Ephb2-201ENSMUST00000059287 4804 ntAPPRIS ALT2 TSL 2 BASIC14.34□□□□□ -0.11
Ldb2O55203 Txndc11-202ENSMUST00000118362 4248 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Il11ra1-201ENSMUST00000098132 2009 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC14.34□□□□□ -0.11
Ldb2O55203 Trappc2-203ENSMUST00000116495 1613 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC14.34□□□□□ -0.11
Ldb2O55203 Nyap1-201ENSMUST00000061789 3912 ntAPPRIS P3 TSL 5 BASIC14.34□□□□□ -0.11
Ldb2O55203 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Gm25287-201ENSMUST00000103846 110 ntBASIC14.34□□□□□ -0.11
Ldb2O55203 Gm22918-201ENSMUST00000103855 110 ntBASIC14.34□□□□□ -0.11
Ldb2O55203 Gm13015-201ENSMUST00000118674 204 ntBASIC14.34□□□□□ -0.11
Ldb2O55203 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC14.34□□□□□ -0.11
Ldb2O55203 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.34□□□□□ -0.11
Ldb2O55203 Gssos1-201ENSMUST00000142509 716 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Gm26308-201ENSMUST00000157768 69 ntBASIC14.34□□□□□ -0.11
Ldb2O55203 Gm8116-201ENSMUST00000182917 1201 ntBASIC14.34□□□□□ -0.11
Ldb2O55203 Gm43474-201ENSMUST00000196415 774 ntBASIC14.34□□□□□ -0.11
Ldb2O55203 Syt17-204ENSMUST00000203796 2957 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 1700025J12Rik-201ENSMUST00000205586 630 ntTSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Stard3nl-209ENSMUST00000221380 1268 ntTSL 5 BASIC14.34□□□□□ -0.11
Ldb2O55203 Sema3b-201ENSMUST00000073448 2987 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Gm27177-203ENSMUST00000184034 1911 ntTSL 5 BASIC14.34□□□□□ -0.11
Ldb2O55203 Tuft1-203ENSMUST00000196655 2156 ntTSL 5 BASIC14.34□□□□□ -0.11
Ldb2O55203 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Midn-201ENSMUST00000042057 3727 ntAPPRIS P3 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 AC167013.2-201ENSMUST00000228520 2684 ntBASIC14.34□□□□□ -0.11
Ldb2O55203 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC14.34□□□□□ -0.11
Ldb2O55203 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ldb2O55203 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ldb2O55203 Clec16a-204ENSMUST00000115824 6244 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.11
Ldb2O55203 Clec16a-202ENSMUST00000066345 6244 ntAPPRIS P3 TSL 5 BASIC14.33□□□□□ -0.11
Ldb2O55203 Josd1-201ENSMUST00000023061 3394 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.11
Ldb2O55203 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC14.33□□□□□ -0.12
Ldb2O55203 Pigv-201ENSMUST00000062118 3979 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Oxtr-201ENSMUST00000053306 4704 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Mbtps2-201ENSMUST00000058098 4797 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ldb2O55203 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Tex30-206ENSMUST00000133677 935 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 AC155937.1-202ENSMUST00000156229 621 ntAPPRIS P1 TSL 2 BASIC14.33□□□□□ -0.12
Ldb2O55203 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Dnmt3b-201ENSMUST00000056495 4318 ntAPPRIS ALT2 TSL 5 BASIC14.33□□□□□ -0.12
Ldb2O55203 Sh2b1-205ENSMUST00000205733 2956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ldb2O55203 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ldb2O55203 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC14.33□□□□□ -0.12
Ldb2O55203 Slc52a3-203ENSMUST00000109859 2204 ntTSL 5 BASIC14.33□□□□□ -0.12
Ldb2O55203 Nt5c2-203ENSMUST00000172239 3148 ntTSL 5 BASIC14.32□□□□□ -0.12
Ldb2O55203 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb2O55203 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb2O55203 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb2O55203 Kank2-201ENSMUST00000034717 5040 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb2O55203 Plxdc2-203ENSMUST00000114703 2061 ntTSL 5 BASIC14.32□□□□□ -0.12
Ldb2O55203 Skor1-202ENSMUST00000116613 3591 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb2O55203 Cdk2-202ENSMUST00000026416 2406 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb2O55203 Olfr1411-202ENSMUST00000190844 1821 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ldb2O55203 Ccdc158-203ENSMUST00000150359 3353 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb2O55203 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC14.32□□□□□ -0.12
Ldb2O55203 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb2O55203 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ldb2O55203 Vdac2-209ENSMUST00000173456 956 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ldb2O55203 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 107.6 ms