Protein–RNA interactions for Protein: O55055

Trdmt1, tRNA (cytosine(38)-C(5))-methyltransferase, mousemouse

Predictions only

Length 415 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trdmt1O55055 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Fubp3-201ENSMUST00000055244 3648 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Sphk1-205ENSMUST00000106387 1957 ntAPPRIS ALT2 TSL 5 BASIC15.82■□□□□ 0.12
Trdmt1O55055 Pnpo-201ENSMUST00000018803 1994 ntAPPRIS P1 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Islr2-202ENSMUST00000163200 4123 ntAPPRIS ALT2 TSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Gm42632-201ENSMUST00000201707 2411 ntBASIC15.82■□□□□ 0.12
Trdmt1O55055 Txnrd3-202ENSMUST00000101171 2494 ntTSL 1 (best) BASIC15.82■□□□□ 0.12
Trdmt1O55055 Nubpl-201ENSMUST00000040090 2987 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Fam185a-201ENSMUST00000056045 3027 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Ercc2-203ENSMUST00000108461 2799 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Ftcd-201ENSMUST00000001183 1933 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Snrpa-202ENSMUST00000122202 1336 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Gm21983-201ENSMUST00000154724 1690 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trdmt1O55055 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC15.81■□□□□ 0.12
Trdmt1O55055 Pfdn6-205ENSMUST00000174426 396 ntTSL 2 BASIC15.81■□□□□ 0.12
Trdmt1O55055 Gm17634-201ENSMUST00000181383 1285 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Ighv8-14-201ENSMUST00000196781 358 ntBASIC15.81■□□□□ 0.12
Trdmt1O55055 Gm18307-201ENSMUST00000206864 949 ntBASIC15.81■□□□□ 0.12
Trdmt1O55055 Cabp4-201ENSMUST00000025761 1431 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Golt1b-201ENSMUST00000032372 2818 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Tead4-201ENSMUST00000006311 3076 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Socs4-201ENSMUST00000065562 6877 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Abl1-202ENSMUST00000075759 6327 ntAPPRIS ALT2 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Mcm9-201ENSMUST00000075540 4882 ntAPPRIS P1 TSL 2 BASIC15.81■□□□□ 0.12
Trdmt1O55055 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Gata5-201ENSMUST00000015771 3277 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Sh3rf3-205ENSMUST00000153031 5682 ntAPPRIS P1 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Slc8b1-202ENSMUST00000076051 2661 ntTSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Zyx-207ENSMUST00000203652 2605 ntAPPRIS P3 TSL 1 (best) BASIC15.81■□□□□ 0.12
Trdmt1O55055 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Rnf167-201ENSMUST00000037534 1833 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Fam3a-205ENSMUST00000114142 1586 ntAPPRIS P1 TSL 5 BASIC15.8■□□□□ 0.12
Trdmt1O55055 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trdmt1O55055 Fgf11-202ENSMUST00000102585 3039 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Rfx5-201ENSMUST00000029772 4189 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Unc50-202ENSMUST00000114925 1094 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trdmt1O55055 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Gm31728-201ENSMUST00000192164 435 ntTSL 3 BASIC15.8■□□□□ 0.12
Trdmt1O55055 Gm7446-201ENSMUST00000221035 1240 ntBASIC15.8■□□□□ 0.12
Trdmt1O55055 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trdmt1O55055 A730061H03Rik-201ENSMUST00000066106 465 ntAPPRIS P1 BASIC15.8■□□□□ 0.12
Trdmt1O55055 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC15.8■□□□□ 0.12
Trdmt1O55055 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Micall1-201ENSMUST00000040320 6701 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Gtf2ird1-208ENSMUST00000167084 3283 ntTSL 5 BASIC15.8■□□□□ 0.12
Trdmt1O55055 Ephb4-201ENSMUST00000061244 4340 ntAPPRIS P3 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Coro1c-201ENSMUST00000004646 3491 ntAPPRIS P1 TSL 1 (best) BASIC15.8■□□□□ 0.12
Trdmt1O55055 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Picalm-206ENSMUST00000207484 8209 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC15.79■□□□□ 0.12
Trdmt1O55055 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.79■□□□□ 0.12
Trdmt1O55055 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 9330020H09Rik-201ENSMUST00000163781 2147 ntTSL 2 BASIC15.79■□□□□ 0.12
Trdmt1O55055 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Mapk9-201ENSMUST00000020634 4675 ntAPPRIS P3 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC15.79■□□□□ 0.12
Trdmt1O55055 Gm5678-201ENSMUST00000120115 939 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trdmt1O55055 Slc2a9-207ENSMUST00000143758 1296 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Gm44608-201ENSMUST00000206827 855 ntBASIC15.79■□□□□ 0.12
Trdmt1O55055 AC153962.4-201ENSMUST00000217878 242 ntBASIC15.79■□□□□ 0.12
Trdmt1O55055 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Rsph9-201ENSMUST00000024762 966 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC15.79■□□□□ 0.12
Trdmt1O55055 Cachd1-202ENSMUST00000097955 4277 ntAPPRIS ALT2 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Dpm1-209ENSMUST00000154111 2293 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Ccdc158-204ENSMUST00000151180 3352 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Rock1-201ENSMUST00000067947 6187 ntAPPRIS P1 TSL 5 BASIC15.79■□□□□ 0.12
Trdmt1O55055 Ctage5-213ENSMUST00000176464 4434 ntTSL 5 BASIC15.79■□□□□ 0.12
Trdmt1O55055 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC15.79■□□□□ 0.12
Trdmt1O55055 Fam174b-201ENSMUST00000107456 2683 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Oxr1-206ENSMUST00000170127 4251 ntTSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Asic1-201ENSMUST00000023758 4114 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC15.79■□□□□ 0.12
Trdmt1O55055 Cd5l-201ENSMUST00000015998 2036 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Eml3-202ENSMUST00000224272 2978 ntAPPRIS ALT2 BASIC15.78■□□□□ 0.12
Trdmt1O55055 Nes-201ENSMUST00000090973 6126 ntAPPRIS P2 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Trdmt1O55055 Kdf1-203ENSMUST00000121797 2256 ntAPPRIS ALT2 TSL 2 BASIC15.78■□□□□ 0.12
Trdmt1O55055 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.12
Retrieved 100 of 76,532 protein–RNA pairs in 43.5 ms