Protein–RNA interactions for Protein: O54908

Dkk1, Dickkopf-related protein 1, mousemouse

Predictions only

Length 272 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dkk1O54908 Endov-203ENSMUST00000106245 5126 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Pqlc1-203ENSMUST00000123750 2004 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Nyx-201ENSMUST00000050434 5183 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Gpd2-202ENSMUST00000112618 5759 ntTSL 5 BASIC13.03□□□□□ -0.32
Dkk1O54908 Ntng1-205ENSMUST00000106575 1620 ntAPPRIS ALT1 TSL 5 BASIC13.03□□□□□ -0.32
Dkk1O54908 Ntng1-202ENSMUST00000072596 1620 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Bcl2l14-206ENSMUST00000163589 2131 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Dkk1O54908 Sptbn4-203ENSMUST00000108363 4724 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Sptbn4-204ENSMUST00000108364 4740 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Agbl5-202ENSMUST00000114700 3296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Tpt1-ps2-201ENSMUST00000120548 521 ntBASIC13.03□□□□□ -0.32
Dkk1O54908 Gm12383-201ENSMUST00000120628 760 ntBASIC13.03□□□□□ -0.32
Dkk1O54908 Gm13830-202ENSMUST00000144202 381 ntTSL 3 BASIC13.03□□□□□ -0.32
Dkk1O54908 Mfap2-203ENSMUST00000166376 890 ntAPPRIS P1 TSL 2 BASIC13.03□□□□□ -0.32
Dkk1O54908 Gm20467-201ENSMUST00000172872 994 ntTSL 3 BASIC13.03□□□□□ -0.32
Dkk1O54908 Vmn1r-ps49-201ENSMUST00000177009 879 ntBASIC13.03□□□□□ -0.32
Dkk1O54908 Gm36371-201ENSMUST00000209043 1103 ntBASIC13.03□□□□□ -0.32
Dkk1O54908 AC165245.1-201ENSMUST00000214181 636 ntTSL 3 BASIC13.03□□□□□ -0.32
Dkk1O54908 Gm18329-201ENSMUST00000215832 589 ntBASIC13.03□□□□□ -0.32
Dkk1O54908 AV026068-225ENSMUST00000225042 490 ntBASIC13.03□□□□□ -0.32
Dkk1O54908 Pspn-201ENSMUST00000002740 474 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Olfr1032-201ENSMUST00000062166 933 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Dkk1O54908 Gnat1-201ENSMUST00000010205 2328 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Fbxl3-206ENSMUST00000145693 3352 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Acat2-203ENSMUST00000159697 1800 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Mindy1-212ENSMUST00000168223 1812 ntTSL 5 BASIC13.03□□□□□ -0.32
Dkk1O54908 Apol8-201ENSMUST00000070911 1838 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Gm38368-201ENSMUST00000193181 1335 ntBASIC13.03□□□□□ -0.32
Dkk1O54908 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Gm37960-201ENSMUST00000192402 1897 ntBASIC13.03□□□□□ -0.32
Dkk1O54908 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC13.03□□□□□ -0.32
Dkk1O54908 Syne4-201ENSMUST00000054594 1355 ntAPPRIS P3 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Klhl34-201ENSMUST00000087157 1935 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Dkk1O54908 Cbln3-202ENSMUST00000172378 1438 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Enoph1-201ENSMUST00000031268 1420 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Gal3st4-202ENSMUST00000161279 2059 ntAPPRIS P3 TSL 3 BASIC13.03□□□□□ -0.32
Dkk1O54908 4833422C13Rik-201ENSMUST00000099331 2083 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 Hspa1b-201ENSMUST00000172753 2803 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Dkk1O54908 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Dkk1O54908 AC130669.1-201ENSMUST00000228537 1672 ntBASIC13.02□□□□□ -0.32
Dkk1O54908 Ocln-205ENSMUST00000160859 2443 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Dkk1O54908 Sybu-207ENSMUST00000227305 3124 ntAPPRIS ALT2 BASIC13.02□□□□□ -0.32
Dkk1O54908 Adipor1-201ENSMUST00000027727 3123 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Dkk1O54908 Zbed5-201ENSMUST00000041466 2492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Dkk1O54908 Sept6-203ENSMUST00000115239 1845 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Dkk1O54908 Gm37648-201ENSMUST00000192072 2563 ntBASIC13.02□□□□□ -0.32
Dkk1O54908 Nop56-202ENSMUST00000103198 1877 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Dkk1O54908 Gm1976-202ENSMUST00000182639 1853 ntTSL 2 BASIC13.02□□□□□ -0.32
Dkk1O54908 Crebl2-201ENSMUST00000046303 3629 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Tcea1-202ENSMUST00000165720 2854 ntTSL 5 BASIC13.02□□□□□ -0.33
Dkk1O54908 Espnl-202ENSMUST00000176156 2886 ntTSL 5 BASIC13.02□□□□□ -0.33
Dkk1O54908 Rabggta-205ENSMUST00000227061 2882 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Dkk1O54908 Naa10-203ENSMUST00000114387 979 ntAPPRIS ALT2 TSL 2 BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm14481-201ENSMUST00000117178 629 ntBASIC13.02□□□□□ -0.33
Dkk1O54908 Gm13118-201ENSMUST00000120402 549 ntBASIC13.02□□□□□ -0.33
Dkk1O54908 Pcp2-205ENSMUST00000142431 524 ntTSL 2 BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm11665-201ENSMUST00000148136 285 ntTSL 5 BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm14950-201ENSMUST00000149500 1155 ntTSL 5 BASIC13.02□□□□□ -0.33
Dkk1O54908 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm8185-201ENSMUST00000160999 669 ntBASIC13.02□□□□□ -0.33
Dkk1O54908 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 4930532M18Rik-201ENSMUST00000187189 481 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm29243-201ENSMUST00000188318 418 ntTSL 5 BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC13.02□□□□□ -0.33
Dkk1O54908 4930542C16Rik-203ENSMUST00000212108 1207 ntTSL 5 BASIC13.02□□□□□ -0.33
Dkk1O54908 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm5364-201ENSMUST00000216789 889 ntBASIC13.02□□□□□ -0.33
Dkk1O54908 AC157017.2-201ENSMUST00000218354 777 ntBASIC13.02□□□□□ -0.33
Dkk1O54908 AC122840.3-201ENSMUST00000221474 486 ntTSL 5 BASIC13.02□□□□□ -0.33
Dkk1O54908 Pmm1-202ENSMUST00000071462 1059 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Olfr1471-201ENSMUST00000096203 945 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Dkk1O54908 Tjp3-201ENSMUST00000045744 3024 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Kat2a-201ENSMUST00000006973 3043 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 St8sia6-201ENSMUST00000003509 7618 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm9742-202ENSMUST00000222219 1396 ntBASIC13.02□□□□□ -0.33
Dkk1O54908 1600014C10Rik-208ENSMUST00000179525 2326 ntTSL 2 BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm2885-201ENSMUST00000181895 1442 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm42435-201ENSMUST00000196630 1448 ntBASIC13.02□□□□□ -0.33
Dkk1O54908 Tead2-203ENSMUST00000107801 3396 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Papola-202ENSMUST00000109901 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Gm21897-201ENSMUST00000178312 1500 ntAPPRIS P1 BASIC13.02□□□□□ -0.33
Dkk1O54908 Sirt5-206ENSMUST00000221481 1548 ntTSL 5 BASIC13.02□□□□□ -0.33
Dkk1O54908 AC154186.1-201ENSMUST00000227711 1597 ntBASIC13.02□□□□□ -0.33
Dkk1O54908 Gal3st1-203ENSMUST00000109981 1600 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Celf4-206ENSMUST00000224553 1729 ntBASIC13.02□□□□□ -0.33
Dkk1O54908 E230016M11Rik-201ENSMUST00000130657 1764 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 Siglece-201ENSMUST00000032667 1849 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Dkk1O54908 1010001N08Rik-201ENSMUST00000180789 1967 ntTSL 2 BASIC13.01□□□□□ -0.33
Dkk1O54908 Nsd3-207ENSMUST00000143445 2416 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 B230219D22Rik-201ENSMUST00000057844 4652 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 2810474O19Rik-209ENSMUST00000189932 5269 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Foxp4-201ENSMUST00000097311 3197 ntAPPRIS P4 TSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Fam219a-201ENSMUST00000108049 3296 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 A130030D18Rik-201ENSMUST00000128608 654 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Dkk1O54908 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms