Protein–RNA interactions for Protein: O35245

Pkd2, Polycystin-2, mousemouse

Predictions only

Length 966 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pkd2O35245 AC162938.1-201ENSMUST00000213140 2323 ntBASIC20.48■□□□□ 0.87
Pkd2O35245 Paf1-201ENSMUST00000003529 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Col11a2-202ENSMUST00000114252 5620 ntAPPRIS ALT2 TSL 5 BASIC20.48■□□□□ 0.87
Pkd2O35245 Atxn7-202ENSMUST00000223714 2954 ntAPPRIS ALT2 BASIC20.48■□□□□ 0.87
Pkd2O35245 Mapk8ip3-201ENSMUST00000088345 5543 ntAPPRIS P3 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Myl4-203ENSMUST00000106957 943 ntAPPRIS P1 TSL 3 BASIC20.48■□□□□ 0.87
Pkd2O35245 Gfpt1-203ENSMUST00000113657 1200 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Mrpl53-201ENSMUST00000113938 695 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC20.48■□□□□ 0.87
Pkd2O35245 Gm29542-201ENSMUST00000186876 704 ntTSL 3 BASIC20.48■□□□□ 0.87
Pkd2O35245 Ociad1-210ENSMUST00000202250 800 ntTSL 2 BASIC20.48■□□□□ 0.87
Pkd2O35245 1700020A23Rik-201ENSMUST00000028898 712 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Tsc22d4-203ENSMUST00000100540 2730 ntTSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Cpd-201ENSMUST00000021201 7946 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Lrrc41-201ENSMUST00000030471 3065 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Rexo4-201ENSMUST00000064244 2281 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC20.48■□□□□ 0.87
Pkd2O35245 Gm43598-201ENSMUST00000202482 2479 ntBASIC20.48■□□□□ 0.87
Pkd2O35245 Casc3-201ENSMUST00000017384 3963 ntAPPRIS P1 TSL 2 BASIC20.48■□□□□ 0.87
Pkd2O35245 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Kit-204ENSMUST00000144270 5241 ntAPPRIS ALT2 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC20.48■□□□□ 0.87
Pkd2O35245 Fam189b-202ENSMUST00000117278 2593 ntTSL 5 BASIC20.47■□□□□ 0.87
Pkd2O35245 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Gm39027-201ENSMUST00000208560 2942 ntTSL 5 BASIC20.47■□□□□ 0.87
Pkd2O35245 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Bcor-204ENSMUST00000115513 6941 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Sptbn4-202ENSMUST00000108362 4861 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Gspt2-201ENSMUST00000096368 2491 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pkd2O35245 Sgtb-201ENSMUST00000044385 3048 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Rxra-203ENSMUST00000113934 1989 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Tchp-201ENSMUST00000094441 2882 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Ly6f-202ENSMUST00000189654 818 ntAPPRIS P1 TSL 2 BASIC20.47■□□□□ 0.87
Pkd2O35245 AL593843.1-201ENSMUST00000195891 145 ntBASIC20.47■□□□□ 0.87
Pkd2O35245 Gm44608-201ENSMUST00000206827 855 ntBASIC20.47■□□□□ 0.87
Pkd2O35245 Srd5a2-201ENSMUST00000043458 854 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Mrps21-202ENSMUST00000072587 405 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Hist1h3b-201ENSMUST00000091703 620 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pkd2O35245 Stard7-202ENSMUST00000110375 3116 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Klhl29-201ENSMUST00000020958 7041 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Gm44645-201ENSMUST00000205492 1653 ntBASIC20.47■□□□□ 0.87
Pkd2O35245 Map6-203ENSMUST00000122101 3233 ntAPPRIS ALT2 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Pou3f2-201ENSMUST00000178174 5587 ntAPPRIS P1 BASIC20.47■□□□□ 0.87
Pkd2O35245 Rhobtb1-210ENSMUST00000167384 2331 ntTSL 5 BASIC20.47■□□□□ 0.87
Pkd2O35245 Nr1d1-201ENSMUST00000064941 2721 ntAPPRIS P1 TSL 1 (best) BASIC20.47■□□□□ 0.87
Pkd2O35245 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC20.46■□□□□ 0.87
Pkd2O35245 Cobl-203ENSMUST00000109651 5541 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Tarsl2-201ENSMUST00000032728 3192 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Ctnnb1-201ENSMUST00000007130 3623 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Ldb3-207ENSMUST00000227819 1499 ntBASIC20.46■□□□□ 0.87
Pkd2O35245 Gm12859-201ENSMUST00000117834 427 ntBASIC20.46■□□□□ 0.87
Pkd2O35245 Gm12786-201ENSMUST00000129617 644 ntTSL 3 BASIC20.46■□□□□ 0.87
Pkd2O35245 Gm10766-202ENSMUST00000194123 606 ntBASIC20.46■□□□□ 0.87
Pkd2O35245 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Sgsm2-201ENSMUST00000057631 4743 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Sema6d-201ENSMUST00000051419 4503 ntAPPRIS ALT2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Llgl1-201ENSMUST00000052346 4303 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Ccdc13-202ENSMUST00000135986 2640 ntAPPRIS P1 TSL 5 BASIC20.46■□□□□ 0.87
Pkd2O35245 AI849053-201ENSMUST00000181021 2658 ntTSL 3 BASIC20.46■□□□□ 0.87
Pkd2O35245 Scube2-203ENSMUST00000106729 3563 ntAPPRIS P2 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Psen2-204ENSMUST00000111106 2020 ntAPPRIS P2 TSL 5 BASIC20.46■□□□□ 0.87
Pkd2O35245 Fbln7-201ENSMUST00000028864 2905 ntAPPRIS P1 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC20.46■□□□□ 0.87
Pkd2O35245 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.87
Pkd2O35245 Rnf111-201ENSMUST00000034739 4880 ntAPPRIS P2 TSL 1 (best) BASIC20.45■□□□□ 0.87
Pkd2O35245 Slc35f1-201ENSMUST00000105473 4941 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Rbbp9-201ENSMUST00000028915 2170 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Tpbg-201ENSMUST00000006559 3603 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Kdm3a-201ENSMUST00000065509 4816 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Zfp296-201ENSMUST00000108453 1530 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Gm12446-202ENSMUST00000152069 713 ntTSL 2 BASIC20.45■□□□□ 0.86
Pkd2O35245 Ighv8-14-201ENSMUST00000196781 358 ntBASIC20.45■□□□□ 0.86
Pkd2O35245 Gm40193-201ENSMUST00000209971 237 ntAPPRIS P1 TSL 5 BASIC20.45■□□□□ 0.86
Pkd2O35245 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Gm9797-201ENSMUST00000052902 613 ntBASIC20.45■□□□□ 0.86
Pkd2O35245 Med8-202ENSMUST00000073881 1052 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Fh1-201ENSMUST00000027810 2636 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Ddb2-201ENSMUST00000028696 1557 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC20.45■□□□□ 0.86
Pkd2O35245 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Rrp1-201ENSMUST00000062678 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.45■□□□□ 0.86
Pkd2O35245 Tspoap1-202ENSMUST00000100644 7390 ntAPPRIS ALT2 TSL 5 BASIC20.45■□□□□ 0.86
Pkd2O35245 Gm9109-201ENSMUST00000120254 1405 ntBASIC20.44■□□□□ 0.86
Pkd2O35245 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC20.44■□□□□ 0.86
Pkd2O35245 Slc44a5-201ENSMUST00000089948 4098 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Pkd2O35245 Ermp1-203ENSMUST00000159692 7058 ntAPPRIS P1 TSL 1 (best) BASIC20.44■□□□□ 0.86
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms