Protein–RNA interactions for Protein: O35137

Alx4, Homeobox protein aristaless-like 4, mousemouse

Predictions only

Length 399 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Alx4O35137 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC12.88□□□□□ -0.35
Alx4O35137 Cfd-202ENSMUST00000217837 871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Lrr1-203ENSMUST00000222520 767 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 AC102291.3-201ENSMUST00000226566 405 ntBASIC12.88□□□□□ -0.35
Alx4O35137 Ndufv2-201ENSMUST00000024909 927 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Cmtm8-201ENSMUST00000047013 1064 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Rps4l-201ENSMUST00000071745 943 ntBASIC12.88□□□□□ -0.35
Alx4O35137 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Ppt2-210ENSMUST00000171376 1750 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Lrrc17-201ENSMUST00000035651 2154 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Zfp747-201ENSMUST00000067425 2684 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC12.88□□□□□ -0.35
Alx4O35137 Lrp8os2-204ENSMUST00000188737 3078 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Scube1-205ENSMUST00000171496 7824 ntAPPRIS P3 TSL 5 BASIC12.88□□□□□ -0.35
Alx4O35137 Galnt2-201ENSMUST00000034458 4113 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Arpc1b-201ENSMUST00000085679 3105 ntAPPRIS P2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Robo4-205ENSMUST00000214185 4952 ntAPPRIS ALT2 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.88□□□□□ -0.35
Alx4O35137 Armcx1-203ENSMUST00000113197 2179 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Jph3-201ENSMUST00000026357 3637 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC12.87□□□□□ -0.35
Alx4O35137 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Ifnz-201ENSMUST00000105144 1462 ntAPPRIS P1 BASIC12.87□□□□□ -0.35
Alx4O35137 Arhgap8-205ENSMUST00000168811 1464 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Pcdha11-201ENSMUST00000115658 5359 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Nap1l1-206ENSMUST00000219143 1365 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Plpbp-202ENSMUST00000098851 1368 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Ift52-201ENSMUST00000018002 2248 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.87□□□□□ -0.35
Alx4O35137 Platr15-201ENSMUST00000147128 768 ntTSL 5 BASIC12.87□□□□□ -0.35
Alx4O35137 1810008I18Rik-202ENSMUST00000187848 819 ntTSL 3 BASIC12.87□□□□□ -0.35
Alx4O35137 Gm43347-201ENSMUST00000200226 580 ntBASIC12.87□□□□□ -0.35
Alx4O35137 Gm38708-201ENSMUST00000203855 677 ntTSL 5 BASIC12.87□□□□□ -0.35
Alx4O35137 Gm45747-201ENSMUST00000212203 999 ntBASIC12.87□□□□□ -0.35
Alx4O35137 Pde6g-201ENSMUST00000026452 900 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Mrpl17-201ENSMUST00000033170 1028 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 1700080E11Rik-201ENSMUST00000035180 883 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Cdkn2d-201ENSMUST00000086374 1264 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC12.87□□□□□ -0.35
Alx4O35137 Dcp1b-202ENSMUST00000112777 3313 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 F2r-201ENSMUST00000059193 3336 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Gpr85-201ENSMUST00000060442 3661 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Alx4O35137 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC12.87□□□□□ -0.35
Alx4O35137 Tbc1d10c-201ENSMUST00000045864 1758 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Zfp574-202ENSMUST00000179556 4140 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Alx4O35137 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Col2a1-202ENSMUST00000088355 4862 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Mgat1-202ENSMUST00000101293 2729 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Arid4b-201ENSMUST00000039538 5844 ntTSL 5 BASIC12.86□□□□□ -0.35
Alx4O35137 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Ndufb6-202ENSMUST00000108108 480 ntTSL 3 BASIC12.86□□□□□ -0.35
Alx4O35137 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC12.86□□□□□ -0.35
Alx4O35137 Hmgb1-208ENSMUST00000139443 923 ntTSL 2 BASIC12.86□□□□□ -0.35
Alx4O35137 Psma3-204ENSMUST00000160864 859 ntTSL 5 BASIC12.86□□□□□ -0.35
Alx4O35137 Dhrs7c-205ENSMUST00000168612 1108 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Alx4O35137 Gm8584-201ENSMUST00000171982 758 ntBASIC12.86□□□□□ -0.35
Alx4O35137 Gm27459-201ENSMUST00000184860 107 ntBASIC12.86□□□□□ -0.35
Alx4O35137 Lmbrd1-202ENSMUST00000186096 688 ntTSL 2 BASIC12.86□□□□□ -0.35
Alx4O35137 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.86□□□□□ -0.35
Alx4O35137 Lyzl6-201ENSMUST00000021328 900 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Ndufb10-201ENSMUST00000045602 732 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Prdx6-201ENSMUST00000051925 959 ntTSL 2 BASIC12.86□□□□□ -0.35
Alx4O35137 Pard6a-202ENSMUST00000098444 1273 ntTSL 2 BASIC12.86□□□□□ -0.35
Alx4O35137 Dolpp1-202ENSMUST00000113612 1958 ntTSL 3 BASIC12.86□□□□□ -0.35
Alx4O35137 Sept12-201ENSMUST00000170323 2576 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
Alx4O35137 Cnih1-201ENSMUST00000015903 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Pfkfb3-203ENSMUST00000100411 2008 ntTSL 5 BASIC12.86□□□□□ -0.35
Alx4O35137 Sfxn4-203ENSMUST00000135808 1309 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Alx4O35137 Cdh7-206ENSMUST00000137092 2681 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Col4a2-201ENSMUST00000033899 6450 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Hp1bp3-204ENSMUST00000105826 3348 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
Alx4O35137 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Tpr-203ENSMUST00000124973 7430 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Alx4O35137 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC12.85□□□□□ -0.35
Alx4O35137 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 29.8 ms