Protein–RNA interactions for Protein: O08712

Tnfrsf11b, Tumor necrosis factor receptor superfamily member 11B, mousemouse

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Tnfrsf11bO08712 Tmem116-203ENSMUST00000094357 1366 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Megf9-202ENSMUST00000107359 7924 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Gm12892-201ENSMUST00000117367 1146 ntBASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Triqk-201ENSMUST00000143186 888 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Nudt3-209ENSMUST00000176876 465 ntTSL 2 BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Klk2-ps-201ENSMUST00000205342 571 ntBASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 2010107E04Rik-203ENSMUST00000222874 612 ntAPPRIS P1 TSL 2 BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Nudt3-202ENSMUST00000062397 558 ntTSL 3 BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 D130052B06Rik-201ENSMUST00000101371 2295 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Ash2l-201ENSMUST00000068892 3307 ntAPPRIS P4 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Trim68-205ENSMUST00000210855 2301 ntTSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Sugp2-214ENSMUST00000164403 4099 ntAPPRIS P1 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Tsc2-205ENSMUST00000226398 5459 ntAPPRIS P2 BASIC14.65□□□□□ -0.06
Tnfrsf11bO08712 Pigg-203ENSMUST00000119014 4573 ntAPPRIS ALT2 TSL 5 BASIC14.65□□□□□ -0.07
Tnfrsf11bO08712 Zdhhc7-201ENSMUST00000034280 3069 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Wwc2-201ENSMUST00000057561 8678 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Zbed4-201ENSMUST00000041297 5425 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Gpr155-202ENSMUST00000076463 5061 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Pde4dip-202ENSMUST00000090750 8376 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Rcbtb1-202ENSMUST00000043227 3903 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Epb41l1-205ENSMUST00000109574 5904 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Plekhn1-201ENSMUST00000105569 3014 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Pcdha12-201ENSMUST00000047614 5335 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Ifna12-201ENSMUST00000102806 797 ntAPPRIS P1 BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Gm1401-201ENSMUST00000122048 772 ntBASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Prr3-202ENSMUST00000165613 767 ntTSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 1600014C10Rik-207ENSMUST00000179503 784 ntTSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Pik3ip1-202ENSMUST00000093399 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Cdkn2aip-202ENSMUST00000212175 3393 ntAPPRIS P2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Gm37411-201ENSMUST00000194180 2282 ntBASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Fgfr3-201ENSMUST00000067150 4218 ntAPPRIS P4 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Actr1b-201ENSMUST00000043951 3248 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 R3hcc1-202ENSMUST00000121142 1958 ntAPPRIS ALT2 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Cdx4-201ENSMUST00000033689 1963 ntAPPRIS P1 TSL 1 (best) BASIC14.64□□□□□ -0.07
Tnfrsf11bO08712 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm43399-201ENSMUST00000202546 2374 ntBASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm26847-201ENSMUST00000180407 2109 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Mctp1-204ENSMUST00000125209 4715 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Dmrtc2-201ENSMUST00000011493 1619 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Ankrd33b-204ENSMUST00000123325 7466 ntAPPRIS ALT2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm37240-203ENSMUST00000154148 2913 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm14812-201ENSMUST00000156494 1794 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Hcrtr1-201ENSMUST00000030562 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Ppip5k2-201ENSMUST00000042509 5882 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Vps25-203ENSMUST00000100414 1220 ntTSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm16156-201ENSMUST00000141168 713 ntTSL 3 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm9727-201ENSMUST00000161387 555 ntBASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm27002-201ENSMUST00000182789 620 ntTSL 2 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm44492-201ENSMUST00000197012 141 ntBASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm5364-201ENSMUST00000216789 889 ntBASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 AC102291.3-201ENSMUST00000226566 405 ntBASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Gm9945-201ENSMUST00000067523 932 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Olfr520-201ENSMUST00000098264 951 ntAPPRIS P1 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Rb1cc1-201ENSMUST00000027040 7607 ntAPPRIS P1 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Ubtf-209ENSMUST00000173870 2936 ntAPPRIS P3 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Itsn1-202ENSMUST00000064797 7418 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Keap1-205ENSMUST00000194542 3151 ntAPPRIS P2 TSL 1 (best) BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC14.63□□□□□ -0.07
Tnfrsf11bO08712 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 AC131586.3-201ENSMUST00000228355 1367 ntBASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Depdc1b-201ENSMUST00000051594 2563 ntAPPRIS P2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Sh2b1-204ENSMUST00000205497 2854 ntAPPRIS ALT2 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Trp53bp2-201ENSMUST00000117245 4361 ntAPPRIS P1 TSL 5 BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Atf7ip2-202ENSMUST00000100191 889 ntTSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 Hmga1-201ENSMUST00000114888 1593 ntAPPRIS ALT1 TSL 1 (best) BASIC14.62□□□□□ -0.07
Tnfrsf11bO08712 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC14.62□□□□□ -0.07
Retrieved 100 of 76,532 protein–RNA pairs in 46.8 ms