Protein–RNA interactions for Protein: G5E8I7

Usp17lc, Ubiquitin carboxyl-terminal hydrolase 17-like protein C, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Usp17lcG5E8I7 Cbfa2t3-202ENSMUST00000064674 2867 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
Usp17lcG5E8I7 Ank3-223ENSMUST00000182557 1569 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Gm13074-201ENSMUST00000124848 2735 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Ppia-206ENSMUST00000213200 1450 ntTSL 5 BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Tmem59l-201ENSMUST00000045286 1491 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Nhlh2-202ENSMUST00000196324 2647 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Tnip2-202ENSMUST00000087737 1987 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Lmtk2-201ENSMUST00000041804 8114 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Tsc22d2-203ENSMUST00000199164 4659 ntAPPRIS ALT2 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Chaf1b-202ENSMUST00000117099 1894 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Xiap-203ENSMUST00000115094 6542 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Gm12329-201ENSMUST00000120829 1007 ntBASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Gm26542-201ENSMUST00000180443 1235 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Gm43179-201ENSMUST00000198797 275 ntBASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Cfc1-201ENSMUST00000027298 1040 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Fars2-202ENSMUST00000099582 962 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Taf10-203ENSMUST00000141116 4281 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Btbd1-201ENSMUST00000026093 3001 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Rprd1a-201ENSMUST00000046206 4297 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Ubxn11-201ENSMUST00000070246 2014 ntAPPRIS ALT2 TSL 5 BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Zfp202-203ENSMUST00000168832 3329 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
Usp17lcG5E8I7 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Cbx8-201ENSMUST00000026663 3580 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Ralb-201ENSMUST00000004565 2289 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Arpin-201ENSMUST00000048731 2277 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Loxl4-203ENSMUST00000164786 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Adam9-204ENSMUST00000208247 4044 ntAPPRIS P2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Rnf207-201ENSMUST00000076183 2466 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 4930558J18Rik-201ENSMUST00000181949 2052 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Wscd2-201ENSMUST00000094452 4302 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Gm14660-201ENSMUST00000119809 575 ntBASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Snora78-201ENSMUST00000158630 128 ntBASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Ly6g6e-203ENSMUST00000172678 750 ntAPPRIS P2 TSL 3 BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Gm18827-201ENSMUST00000188341 790 ntBASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Gm5279-201ENSMUST00000199575 745 ntBASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Gm17794-201ENSMUST00000220252 955 ntBASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Ydjc-203ENSMUST00000115706 3097 ntTSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Zfp318-201ENSMUST00000113481 7850 ntAPPRIS P4 TSL 5 BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Rxrb-202ENSMUST00000116612 2283 ntAPPRIS ALT2 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Unc93b1-203ENSMUST00000162708 2266 ntAPPRIS P3 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Zbtb11-201ENSMUST00000050248 4920 ntAPPRIS P1 TSL 5 BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Stx6-201ENSMUST00000027743 4589 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Fam83h-202ENSMUST00000170153 4534 ntAPPRIS P1 TSL 1 (best) BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Kri1-205ENSMUST00000184326 2490 ntAPPRIS ALT2 TSL 5 BASIC16.54■□□□□ 0.24
Usp17lcG5E8I7 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Camkv-201ENSMUST00000035700 3277 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 March8-201ENSMUST00000079012 4450 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Plekhb1-206ENSMUST00000107047 1926 ntAPPRIS ALT1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Htr7-202ENSMUST00000164639 3057 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Ubtf-205ENSMUST00000107119 3013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Nfkbie-201ENSMUST00000024742 2422 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Nipsnap3b-202ENSMUST00000107665 848 ntTSL 2 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Mir3102-201ENSMUST00000175555 104 ntBASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Gm38230-201ENSMUST00000193572 1159 ntBASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Gm9728-201ENSMUST00000200197 1055 ntBASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Wdr45-225ENSMUST00000208443 1172 ntTSL 5 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Urgcp-201ENSMUST00000053427 5527 ntAPPRIS ALT2 TSL 5 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Camkmt-201ENSMUST00000095188 972 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Tnfaip8l1-201ENSMUST00000077788 2379 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Tmem229b-206ENSMUST00000174697 3697 ntAPPRIS P1 TSL 5 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Nelfa-201ENSMUST00000030993 2580 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Strn-203ENSMUST00000145910 8629 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Slit1-201ENSMUST00000025993 5045 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Gm10561-201ENSMUST00000181563 1943 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Celf3-204ENSMUST00000197558 2414 ntTSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Yes1-205ENSMUST00000202543 2657 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 P2ry2-206ENSMUST00000208340 2693 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.24
Usp17lcG5E8I7 Gm10110-201ENSMUST00000081204 1891 ntTSL 5 BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Stox2-208ENSMUST00000211737 4573 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Zkscan3-204ENSMUST00000117721 5788 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Urgcp-206ENSMUST00000170116 5528 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Ren1-201ENSMUST00000094556 1592 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 BC001981-202ENSMUST00000191393 1545 ntBASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Fam120c-201ENSMUST00000073364 5463 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Pnpo-202ENSMUST00000107629 681 ntTSL 3 BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Prss55-203ENSMUST00000171503 1074 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Cox6b2-204ENSMUST00000182173 391 ntTSL 2 BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Gm27731-201ENSMUST00000185192 107 ntBASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Abhd14b-202ENSMUST00000185347 1200 ntAPPRIS P1 TSL 3 BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Tdrp-206ENSMUST00000210414 323 ntTSL 3 BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Clip2-202ENSMUST00000100647 4994 ntAPPRIS P4 TSL 1 (best) BASIC16.52■□□□□ 0.24
Usp17lcG5E8I7 Sorbs1-213ENSMUST00000225153 3589 ntAPPRIS P4 BASIC16.52■□□□□ 0.24
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms