Protein–RNA interactions for Protein: E9Q9Q2

R3hdm1, R3H domain-containing 1, mousemouse

Known RBP Predictions only

Length 1,135 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
R3hdm1E9Q9Q2 Ppef2-201ENSMUST00000031359 2274 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Otud4-202ENSMUST00000173078 7354 ntAPPRIS P4 TSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Gm11918-201ENSMUST00000121660 179 ntBASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Gm43703-201ENSMUST00000200523 763 ntBASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Gpd1l-204ENSMUST00000146623 4391 ntAPPRIS P1 TSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 C77080-201ENSMUST00000052602 5187 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Ttpa-202ENSMUST00000117632 3123 ntTSL 5 BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Cadps2-206ENSMUST00000115361 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Sept8-202ENSMUST00000117061 4563 ntAPPRIS P3 TSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Rhoj-202ENSMUST00000118602 2396 ntTSL 1 (best) BASIC15.91■□□□□ 0.14
R3hdm1E9Q9Q2 Smoc2-201ENSMUST00000024660 2832 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Endou-202ENSMUST00000100249 2405 ntAPPRIS ALT2 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Tomm34-201ENSMUST00000018466 2302 ntAPPRIS P3 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Tbc1d22b-201ENSMUST00000048677 3592 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Lpar5-201ENSMUST00000088292 1393 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Efcab14-202ENSMUST00000106522 2636 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Arhgap44-201ENSMUST00000047463 4074 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Selenoh-202ENSMUST00000102647 654 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Sec11a-203ENSMUST00000119980 903 ntTSL 2 BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Cd209g-201ENSMUST00000130372 1169 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Gm5108-201ENSMUST00000177891 543 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Gm9803-202ENSMUST00000216543 456 ntTSL 5 BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Timm9-206ENSMUST00000221367 836 ntAPPRIS P1 TSL 5 BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Rab17-204ENSMUST00000131428 1557 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Dcaf13-201ENSMUST00000022909 1551 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Spryd4-201ENSMUST00000061995 1583 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Zfp423-202ENSMUST00000109655 4907 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Mfsd2a-201ENSMUST00000030408 2151 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Palm3-201ENSMUST00000055077 2452 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Slc46a3-202ENSMUST00000118527 2210 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
R3hdm1E9Q9Q2 Mef2d-204ENSMUST00000119251 3488 ntTSL 5 BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Ythdf3-203ENSMUST00000191774 3196 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Foxl1-201ENSMUST00000181609 2705 ntAPPRIS P1 BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Appbp2-201ENSMUST00000018625 6463 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Defb30-203ENSMUST00000111208 503 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Defb30-204ENSMUST00000111209 721 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Gm15593-201ENSMUST00000122085 1008 ntBASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 1700042O10Rik-201ENSMUST00000151032 1075 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Pcgf1-202ENSMUST00000165164 918 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Gm17150-201ENSMUST00000165577 381 ntBASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Gm9522-201ENSMUST00000182394 926 ntBASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Gxylt2-201ENSMUST00000032157 7658 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Myl12a-206ENSMUST00000148960 1937 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Ebf4-202ENSMUST00000110287 2580 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Ap4b1-204ENSMUST00000106824 2412 ntTSL 5 BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 AC164565.1-201ENSMUST00000217520 1484 ntBASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Fam103a1-201ENSMUST00000042166 1452 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Neurod2-201ENSMUST00000041685 3142 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Nfkb1-201ENSMUST00000029812 4117 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Chchd5-201ENSMUST00000035481 1325 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Csgalnact2-201ENSMUST00000049344 3661 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Gm16796-201ENSMUST00000126086 3172 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Vwa5b2-203ENSMUST00000100074 2512 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Ctdp1-201ENSMUST00000036229 3713 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC15.89■□□□□ 0.13
R3hdm1E9Q9Q2 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Gpt2-201ENSMUST00000034136 3639 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Gmpr2-201ENSMUST00000002397 1993 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Gm16565-201ENSMUST00000159138 2181 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Tmem219-204ENSMUST00000121532 915 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Tex22-203ENSMUST00000146107 1130 ntAPPRIS P1 TSL 2 BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 9130410C08Rik-201ENSMUST00000155499 1088 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Baiap2l2-205ENSMUST00000170955 1058 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Gm38182-203ENSMUST00000192984 993 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Pcdhgc5-204ENSMUST00000193941 593 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Gm42196-201ENSMUST00000209618 730 ntTSL 5 BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Pcgf1-201ENSMUST00000092614 866 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Ush1c-202ENSMUST00000078680 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Rapsn-203ENSMUST00000111446 1458 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Pard6b-201ENSMUST00000052125 3399 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Ak1-203ENSMUST00000113278 2085 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Acot10-201ENSMUST00000052910 1537 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Pid1-207ENSMUST00000177458 2521 ntTSL 2 BASIC15.88■□□□□ 0.13
R3hdm1E9Q9Q2 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC15.88■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 29.4 ms