Protein–RNA interactions for Protein: D3Z4R1

Hfm1, Probable ATP-dependent DNA helicase HFM1, mousemouse

Predictions only

Length 1,434 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hfm1D3Z4R1 Clcn2-201ENSMUST00000007207 3128 ntAPPRIS P2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Mau2-204ENSMUST00000212308 2887 ntAPPRIS ALT2 TSL 1 (best) BASIC19.94■□□□□ 0.78
Hfm1D3Z4R1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Hypk-204ENSMUST00000126764 961 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Ube2m-208ENSMUST00000165394 1228 ntTSL 5 BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Gm4271-201ENSMUST00000174444 973 ntBASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Gm27243-201ENSMUST00000183964 521 ntBASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Tmem248-202ENSMUST00000111298 3570 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Tcf25-205ENSMUST00000212470 2572 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Dtd2-201ENSMUST00000021339 2564 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Arf3-201ENSMUST00000053183 3579 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Gldc-201ENSMUST00000025778 3754 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Ahcy-201ENSMUST00000054607 2543 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Gclm-201ENSMUST00000029769 5589 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Rpa2-201ENSMUST00000102561 1813 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Arhgef9-219ENSMUST00000199920 1976 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Large2-202ENSMUST00000090582 2291 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Gm26830-201ENSMUST00000180389 993 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Dnm3os-203ENSMUST00000185878 557 ntTSL 5 BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Dnd1-ps-201ENSMUST00000196992 964 ntBASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Gm43822-201ENSMUST00000200285 476 ntBASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Rpl10-202ENSMUST00000074085 855 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
Hfm1D3Z4R1 Xylt1-201ENSMUST00000032892 9020 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Ankrd50-201ENSMUST00000094300 1944 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Prn-201ENSMUST00000124100 2132 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Mars-201ENSMUST00000037290 2939 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Gm10339-203ENSMUST00000225409 1671 ntBASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Obsl1-202ENSMUST00000113567 5679 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Sptbn4-207ENSMUST00000172269 8737 ntAPPRIS ALT2 TSL 2 BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Pld2-201ENSMUST00000018429 3659 ntAPPRIS P3 TSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Map3k10-202ENSMUST00000108341 3403 ntAPPRIS ALT2 TSL 5 BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Gm12203-201ENSMUST00000118235 598 ntBASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Gm12209-201ENSMUST00000120089 596 ntBASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Gm12347-201ENSMUST00000127883 470 ntTSL 3 BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Hmgcll1-207ENSMUST00000183979 1136 ntTSL 5 BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Snhg8-203ENSMUST00000199645 528 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Gm18934-201ENSMUST00000216671 1044 ntBASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 AC133598.1-201ENSMUST00000224327 660 ntBASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Tpm3-202ENSMUST00000118566 2190 ntTSL 5 BASIC19.92■□□□□ 0.78
Hfm1D3Z4R1 Dusp8-201ENSMUST00000039926 4804 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 4732440D04Rik-203ENSMUST00000191825 5428 ntBASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Hnrnpm-205ENSMUST00000139302 2428 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 AC174678.1-201ENSMUST00000228007 2749 ntBASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Pkp2-202ENSMUST00000161342 2931 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Pkp2-201ENSMUST00000039408 2918 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Rnf157-201ENSMUST00000100202 4619 ntAPPRIS P2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Abhd6-202ENSMUST00000166497 2226 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Gm5687-201ENSMUST00000118252 640 ntBASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Ict1os-201ENSMUST00000125653 1052 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Gm26602-201ENSMUST00000181321 285 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Tpd52l1-205ENSMUST00000215515 857 ntTSL 2 BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Cryba4-201ENSMUST00000086629 746 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Phgdh-201ENSMUST00000065793 1893 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 P3h1-201ENSMUST00000030393 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
Hfm1D3Z4R1 Trip4-201ENSMUST00000117083 1999 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Map2k6-202ENSMUST00000100260 2088 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Ntng2-203ENSMUST00000091153 1695 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Zscan29-203ENSMUST00000146243 2894 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Styxl1-202ENSMUST00000111161 963 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Rhox2b-201ENSMUST00000115191 799 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Gm27501-201ENSMUST00000183599 107 ntBASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Gm4857-201ENSMUST00000192718 785 ntBASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Gm17823-201ENSMUST00000217830 1006 ntBASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Asap2-204ENSMUST00000101562 5552 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Ssr1-204ENSMUST00000225319 1610 ntBASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Tmem132e-201ENSMUST00000054245 4386 ntAPPRIS P2 TSL 1 (best) BASIC19.9■□□□□ 0.78
Hfm1D3Z4R1 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC19.89■□□□□ 0.78
Hfm1D3Z4R1 Aldh3a1-201ENSMUST00000019246 1729 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
Hfm1D3Z4R1 Spns1-203ENSMUST00000119846 2017 ntTSL 5 BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Caskin1-201ENSMUST00000024958 6172 ntAPPRIS P1 TSL 5 BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Tubgcp4-215ENSMUST00000186659 2915 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Gm16229-201ENSMUST00000133270 1232 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Hoxb5os-202ENSMUST00000150698 596 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Gm7783-201ENSMUST00000204795 781 ntBASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Gm26917-202ENSMUST00000192833 3329 ntBASIC19.89■□□□□ 0.77
Hfm1D3Z4R1 Tars2-204ENSMUST00000163530 2157 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms