Protein–RNA interactions for Protein: D3YZU1

Shank1, SH3 and multiple ankyrin repeat domains protein 1, mousemouse

Predictions only

Length 2,167 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Shank1D3YZU1 Etnk1-201ENSMUST00000032413 6433 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Cep19-202ENSMUST00000115168 1718 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Clcc1-201ENSMUST00000029483 2224 ntAPPRIS P3 TSL 5 BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Rufy3-203ENSMUST00000196894 3703 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Dlg1-201ENSMUST00000023454 3725 ntTSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Nprl3-201ENSMUST00000020530 2865 ntAPPRIS P2 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Kif22-201ENSMUST00000032915 2115 ntAPPRIS P1 TSL 1 (best) BASIC12.92□□□□□ -0.34
Shank1D3YZU1 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Stx7-201ENSMUST00000020174 2502 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Gm45212-201ENSMUST00000205831 3403 ntBASIC12.91□□□□□ -0.34
Shank1D3YZU1 Plekha8-202ENSMUST00000119706 6739 ntAPPRIS P1 TSL 2 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Gm13464-201ENSMUST00000119418 935 ntBASIC12.91□□□□□ -0.34
Shank1D3YZU1 Oaz2-204ENSMUST00000136166 700 ntTSL 5 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Gm17232-201ENSMUST00000164515 453 ntTSL 2 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Gm17420-201ENSMUST00000164753 153 ntBASIC12.91□□□□□ -0.34
Shank1D3YZU1 Gm3764-203ENSMUST00000180635 1191 ntTSL 5 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Gm44756-201ENSMUST00000206172 1069 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 1700123K08Rik-201ENSMUST00000031501 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Ube2i-201ENSMUST00000049911 1138 ntAPPRIS P1 TSL 3 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Hs3st5-201ENSMUST00000058738 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 D17Wsu92e-202ENSMUST00000114859 3522 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Chtf8-202ENSMUST00000175940 2890 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Bptf-203ENSMUST00000106763 12036 ntAPPRIS ALT2 TSL 5 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 1600020E01Rik-207ENSMUST00000204738 1997 ntTSL 5 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Kcnh1-201ENSMUST00000078470 7242 ntAPPRIS P3 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Adck2-201ENSMUST00000051249 2287 ntTSL 5 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 1700034J05Rik-202ENSMUST00000111622 2023 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Mesd-201ENSMUST00000094215 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Bscl2-201ENSMUST00000086058 1388 ntAPPRIS ALT2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Dctd-203ENSMUST00000170263 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Grid2ip-202ENSMUST00000110733 3825 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Htr2c-203ENSMUST00000112831 809 ntTSL 3 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Gm13392-201ENSMUST00000117708 150 ntBASIC12.91□□□□□ -0.34
Shank1D3YZU1 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.91□□□□□ -0.34
Shank1D3YZU1 AC093043.3-201ENSMUST00000226531 2273 ntBASIC12.91□□□□□ -0.34
Shank1D3YZU1 Mbp-204ENSMUST00000080658 2063 ntTSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC12.91□□□□□ -0.34
Shank1D3YZU1 Rps6kl1-201ENSMUST00000019379 2304 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Asb18-201ENSMUST00000086882 3862 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 CN725425-202ENSMUST00000190436 2041 ntAPPRIS P5 TSL 5 BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Dpysl3-204ENSMUST00000121805 5484 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Ovca2-201ENSMUST00000071562 2670 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Gm36065-202ENSMUST00000219654 1424 ntTSL 5 BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Zfp879-202ENSMUST00000109133 2229 ntTSL 5 BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Gm10710-201ENSMUST00000047876 3971 ntBASIC12.9□□□□□ -0.34
Shank1D3YZU1 Lamtor2-201ENSMUST00000029698 668 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Scgb3a2-201ENSMUST00000043803 842 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Prkg1-206ENSMUST00000182685 1628 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Pcdh10-204ENSMUST00000193252 4638 ntAPPRIS ALT2 BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Spef1-201ENSMUST00000028801 2328 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Zfx-201ENSMUST00000088102 7002 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Nepro-201ENSMUST00000048788 2866 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Pqlc1-204ENSMUST00000129043 1864 ntAPPRIS ALT2 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Papd5-201ENSMUST00000066748 4489 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Atl1-201ENSMUST00000021466 5150 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Trpv4-203ENSMUST00000112219 2295 ntTSL 5 BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Slc16a6-202ENSMUST00000070152 4219 ntAPPRIS P3 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Mis12-201ENSMUST00000048807 3003 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Knop1-205ENSMUST00000116280 5382 ntAPPRIS P3 TSL 5 BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Gm45799-201ENSMUST00000106785 367 ntAPPRIS ALT2 TSL 3 BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Gm12742-201ENSMUST00000117326 410 ntBASIC12.9□□□□□ -0.34
Shank1D3YZU1 Snhg17-201ENSMUST00000133449 933 ntTSL 1 (best) BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Gm8835-201ENSMUST00000173096 1169 ntBASIC12.9□□□□□ -0.34
Shank1D3YZU1 Gm2495-201ENSMUST00000191160 466 ntBASIC12.9□□□□□ -0.34
Shank1D3YZU1 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.9□□□□□ -0.34
Shank1D3YZU1 Gm44799-201ENSMUST00000207639 1202 ntBASIC12.9□□□□□ -0.34
Shank1D3YZU1 Car10-205ENSMUST00000107861 2613 ntTSL 1 (best) BASIC12.9□□□□□ -0.35
Shank1D3YZU1 Lman2l-204ENSMUST00000125304 3378 ntAPPRIS P1 TSL 1 (best) BASIC12.9□□□□□ -0.35
Shank1D3YZU1 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Tmem94-201ENSMUST00000093912 5329 ntAPPRIS P2 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Plin5-201ENSMUST00000019808 1986 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Large2-203ENSMUST00000111284 2449 ntAPPRIS ALT2 TSL 5 BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Opn1sw-203ENSMUST00000147483 1426 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Dusp23-201ENSMUST00000027826 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Mrpl57-201ENSMUST00000022538 2877 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Lix1l-201ENSMUST00000062058 3312 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Dhrs1-201ENSMUST00000002403 1477 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Hus1b-201ENSMUST00000102943 1187 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Plod1-202ENSMUST00000105712 1059 ntTSL 2 BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Mvk-203ENSMUST00000124260 1051 ntTSL 5 BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Snora78-201ENSMUST00000158630 128 ntBASIC12.89□□□□□ -0.35
Shank1D3YZU1 Gm5279-201ENSMUST00000199575 745 ntBASIC12.89□□□□□ -0.35
Shank1D3YZU1 AC155286.1-201ENSMUST00000218632 448 ntBASIC12.89□□□□□ -0.35
Shank1D3YZU1 Flt1-202ENSMUST00000031653 6895 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Cpz-201ENSMUST00000038676 2245 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Wdr1-205ENSMUST00000201260 2139 ntTSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 AC013548.1-201ENSMUST00000228850 4738 ntAPPRIS P1 BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Diras2-201ENSMUST00000057442 4786 ntAPPRIS P1 TSL 1 (best) BASIC12.89□□□□□ -0.35
Shank1D3YZU1 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC12.89□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 34.6 ms