Protein–RNA interactions for Protein: B9EHT4

Clip3, CAP-Gly domain-containing linker protein 3, mousemouse

Predictions only

Length 547 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clip3B9EHT4 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Mageh1-201ENSMUST00000051484 1410 ntAPPRIS P1 BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Sirt5-211ENSMUST00000223194 1398 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Grk5-201ENSMUST00000003313 3165 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Elac1-201ENSMUST00000041138 4971 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 BC037039-201ENSMUST00000192003 2205 ntBASIC14.01□□□□□ -0.17
Clip3B9EHT4 Sh3bgr-201ENSMUST00000048770 1321 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Pcgf5-211ENSMUST00000225920 6443 ntBASIC14.01□□□□□ -0.17
Clip3B9EHT4 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Hpca-207ENSMUST00000139450 812 ntAPPRIS P1 TSL 3 BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Klrg2-202ENSMUST00000201345 1225 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Gm44872-201ENSMUST00000207864 420 ntBASIC14.01□□□□□ -0.17
Clip3B9EHT4 Tssk3-201ENSMUST00000000421 1280 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.01□□□□□ -0.17
Clip3B9EHT4 Chrna4-202ENSMUST00000108851 2071 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC14.01□□□□□ -0.17
Clip3B9EHT4 AC174678.1-201ENSMUST00000228007 2749 ntBASIC14.01□□□□□ -0.17
Clip3B9EHT4 Rnf31-201ENSMUST00000019443 3485 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Sh2b3-202ENSMUST00000086310 4195 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Celf4-207ENSMUST00000225477 2626 ntAPPRIS P3 BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Pltp-201ENSMUST00000059954 1809 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Synrg-207ENSMUST00000183456 3990 ntAPPRIS ALT2 TSL 5 BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Comt-202ENSMUST00000115609 1786 ntAPPRIS P1 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Repin1-202ENSMUST00000118229 3138 ntAPPRIS ALT2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Zfp707-202ENSMUST00000109967 1703 ntAPPRIS P3 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Vopp1-202ENSMUST00000127485 2908 ntTSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Pcolce-201ENSMUST00000031731 1626 ntAPPRIS P2 TSL 1 (best) BASIC14.01□□□□□ -0.17
Clip3B9EHT4 Gm36445-203ENSMUST00000209951 1597 ntTSL 5 BASIC14□□□□□ -0.17
Clip3B9EHT4 Hectd1-202ENSMUST00000179265 9012 ntTSL 5 BASIC14□□□□□ -0.17
Clip3B9EHT4 Gm11738-201ENSMUST00000134069 2158 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Cyb561a3-201ENSMUST00000168445 1474 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clip3B9EHT4 Ppp1r8-201ENSMUST00000030702 2037 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Ski-202ENSMUST00000084103 5309 ntTSL 5 BASIC14□□□□□ -0.17
Clip3B9EHT4 Rab3a-202ENSMUST00000110090 1375 ntAPPRIS P1 TSL 3 BASIC14□□□□□ -0.17
Clip3B9EHT4 Fbxo15-204ENSMUST00000224467 1908 ntAPPRIS ALT2 BASIC14□□□□□ -0.17
Clip3B9EHT4 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Slc2a6-202ENSMUST00000102890 1887 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Fgf17-202ENSMUST00000227123 1336 ntBASIC14□□□□□ -0.17
Clip3B9EHT4 Wdr45b-201ENSMUST00000026173 2321 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Grn-201ENSMUST00000049460 2340 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Gm13616-201ENSMUST00000120600 222 ntBASIC14□□□□□ -0.17
Clip3B9EHT4 Tspan5-203ENSMUST00000121826 1114 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 2810047C21Rik1-201ENSMUST00000172930 915 ntBASIC14□□□□□ -0.17
Clip3B9EHT4 9130230N09Rik-201ENSMUST00000174568 663 ntTSL 3 BASIC14□□□□□ -0.17
Clip3B9EHT4 AC158804.1-201ENSMUST00000219046 541 ntTSL 3 BASIC14□□□□□ -0.17
Clip3B9EHT4 AC166341.4-201ENSMUST00000220625 123 ntBASIC14□□□□□ -0.17
Clip3B9EHT4 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Pcna-ps2-201ENSMUST00000088040 1257 ntAPPRIS P1 BASIC14□□□□□ -0.17
Clip3B9EHT4 Slfnl1-201ENSMUST00000062990 1762 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clip3B9EHT4 Guca1b-201ENSMUST00000024774 1668 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC14□□□□□ -0.17
Clip3B9EHT4 Gm20482-201ENSMUST00000172746 1644 ntTSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Lat2-201ENSMUST00000036362 1637 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Luc7l3-202ENSMUST00000107820 3478 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clip3B9EHT4 Klhl32-204ENSMUST00000108218 7143 ntAPPRIS P1 TSL 5 BASIC14□□□□□ -0.17
Clip3B9EHT4 Evc-201ENSMUST00000031005 4325 ntAPPRIS P2 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Cand2-201ENSMUST00000075995 5474 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Ap3s1-201ENSMUST00000025357 1520 ntAPPRIS P1 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC14□□□□□ -0.17
Clip3B9EHT4 Ankrd24-201ENSMUST00000119336 3561 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Gm13233-201ENSMUST00000118760 1443 ntBASIC13.99□□□□□ -0.17
Clip3B9EHT4 Gm13244-201ENSMUST00000118855 1446 ntBASIC13.99□□□□□ -0.17
Clip3B9EHT4 Asl-205ENSMUST00000161094 1824 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip3B9EHT4 2610011E03Rik-201ENSMUST00000200128 2235 ntBASIC13.99□□□□□ -0.17
Clip3B9EHT4 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Grin1os-201ENSMUST00000129723 2891 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Ghdc-201ENSMUST00000017891 2462 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Phyhd1-204ENSMUST00000113645 1325 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Fmnl2-205ENSMUST00000155586 3939 ntTSL 1 (best) BASIC13.99□□□□□ -0.17
Clip3B9EHT4 E230029C05Rik-202ENSMUST00000207458 2445 ntTSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Psmb5-ps-201ENSMUST00000119744 798 ntBASIC13.99□□□□□ -0.17
Clip3B9EHT4 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Gm24158-201ENSMUST00000175263 71 ntBASIC13.99□□□□□ -0.17
Clip3B9EHT4 Auts2-212ENSMUST00000178555 309 ntBASIC13.99□□□□□ -0.17
Clip3B9EHT4 Mir6956-201ENSMUST00000183598 62 ntBASIC13.99□□□□□ -0.17
Clip3B9EHT4 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Gm7774-201ENSMUST00000200064 533 ntBASIC13.99□□□□□ -0.17
Clip3B9EHT4 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Atf5-203ENSMUST00000209072 595 ntTSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 AC140397.2-201ENSMUST00000224213 834 ntBASIC13.99□□□□□ -0.17
Clip3B9EHT4 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Eif2b2-201ENSMUST00000004910 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Rnf146-201ENSMUST00000037548 4402 ntAPPRIS P1 TSL 2 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Ddc-201ENSMUST00000066237 1922 ntAPPRIS P1 TSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Cacna1g-209ENSMUST00000107791 8002 ntAPPRIS ALT2 TSL 5 BASIC13.99□□□□□ -0.17
Clip3B9EHT4 Miip-202ENSMUST00000119975 1879 ntAPPRIS ALT2 TSL 1 (best) BASIC13.99□□□□□ -0.17
Retrieved 100 of 76,532 protein–RNA pairs in 48.6 ms