Protein–RNA interactions for Protein: B5KM66

Syce3, Synaptonemal complex central element protein 3, mousemouse

Predictions only

Length 88 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Syce3B5KM66 Vars-201ENSMUST00000087315 4137 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Ino80-201ENSMUST00000049920 6354 ntAPPRIS P1 TSL 5 BASIC16.52■□□□□ 0.24
Syce3B5KM66 Piezo1-209ENSMUST00000156333 8219 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Piezo1-201ENSMUST00000067252 8216 ntAPPRIS P2 TSL 5 BASIC16.52■□□□□ 0.24
Syce3B5KM66 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC16.52■□□□□ 0.24
Syce3B5KM66 Pgap2-225ENSMUST00000156529 2034 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Zfp146-201ENSMUST00000062181 2029 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Myh14-201ENSMUST00000048102 6457 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Wapl-205ENSMUST00000169910 4066 ntAPPRIS P3 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Cops9-202ENSMUST00000112999 653 ntTSL 3 BASIC16.52■□□□□ 0.24
Syce3B5KM66 Gm5253-201ENSMUST00000187104 1025 ntBASIC16.52■□□□□ 0.24
Syce3B5KM66 Gm9682-201ENSMUST00000197505 556 ntBASIC16.52■□□□□ 0.24
Syce3B5KM66 Rwdd1-201ENSMUST00000019917 1090 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Prm1-201ENSMUST00000023144 469 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 Olfr571-201ENSMUST00000061738 969 ntAPPRIS P1 BASIC16.52■□□□□ 0.24
Syce3B5KM66 Ift74-202ENSMUST00000107104 1713 ntTSL 2 BASIC16.52■□□□□ 0.24
Syce3B5KM66 Neu2-203ENSMUST00000164128 1733 ntAPPRIS ALT2 TSL 1 (best) BASIC16.52■□□□□ 0.24
Syce3B5KM66 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC16.52■□□□□ 0.23
Syce3B5KM66 Ush1c-207ENSMUST00000176371 1865 ntAPPRIS ALT2 TSL 5 BASIC16.52■□□□□ 0.23
Syce3B5KM66 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC16.52■□□□□ 0.23
Syce3B5KM66 Mob1b-201ENSMUST00000006424 2705 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syce3B5KM66 Mta2-201ENSMUST00000096240 3135 ntAPPRIS P1 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syce3B5KM66 Stra8-201ENSMUST00000031876 1803 ntAPPRIS P2 TSL 1 (best) BASIC16.52■□□□□ 0.23
Syce3B5KM66 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Flot1-209ENSMUST00000174080 1383 ntTSL 5 BASIC16.51■□□□□ 0.23
Syce3B5KM66 Vps35-201ENSMUST00000034131 3474 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Taf7l-201ENSMUST00000009740 1933 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Zfp74-203ENSMUST00000108211 1278 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Gm16194-203ENSMUST00000141239 362 ntTSL 3 BASIC16.51■□□□□ 0.23
Syce3B5KM66 Gm6659-201ENSMUST00000174752 547 ntBASIC16.51■□□□□ 0.23
Syce3B5KM66 Gsdmcl2-204ENSMUST00000186026 736 ntBASIC16.51■□□□□ 0.23
Syce3B5KM66 Gsdmcl1-202ENSMUST00000190937 735 ntBASIC16.51■□□□□ 0.23
Syce3B5KM66 Vkorc1-201ENSMUST00000033074 748 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Purg-201ENSMUST00000070340 1064 ntAPPRIS P1 BASIC16.51■□□□□ 0.23
Syce3B5KM66 Atp6v0c-202ENSMUST00000098862 796 ntAPPRIS P1 TSL 2 BASIC16.51■□□□□ 0.23
Syce3B5KM66 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Kdm6a-201ENSMUST00000044484 5918 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Syce3B5KM66 Kdm6a-202ENSMUST00000052368 5935 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Vwc2-202ENSMUST00000109681 3371 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Arhgef1-202ENSMUST00000098683 3375 ntAPPRIS P4 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Gm38094-201ENSMUST00000195864 2978 ntBASIC16.51■□□□□ 0.23
Syce3B5KM66 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Scn4b-201ENSMUST00000060125 4982 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC16.51■□□□□ 0.23
Syce3B5KM66 Txlng-203ENSMUST00000112315 2525 ntTSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Ythdf2-203ENSMUST00000152796 4129 ntAPPRIS P1 TSL 1 (best) BASIC16.51■□□□□ 0.23
Syce3B5KM66 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Gm37844-201ENSMUST00000192473 4097 ntBASIC16.5■□□□□ 0.23
Syce3B5KM66 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC16.5■□□□□ 0.23
Syce3B5KM66 Ksr1-207ENSMUST00000226282 5260 ntBASIC16.5■□□□□ 0.23
Syce3B5KM66 Auh-201ENSMUST00000021913 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Gm13055-201ENSMUST00000127875 1961 ntTSL 5 BASIC16.5■□□□□ 0.23
Syce3B5KM66 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Nme1-202ENSMUST00000107844 452 ntTSL 3 BASIC16.5■□□□□ 0.23
Syce3B5KM66 Gm13464-201ENSMUST00000119418 935 ntBASIC16.5■□□□□ 0.23
Syce3B5KM66 Gm12644-201ENSMUST00000119935 606 ntBASIC16.5■□□□□ 0.23
Syce3B5KM66 Gm32031-203ENSMUST00000208993 649 ntTSL 2 BASIC16.5■□□□□ 0.23
Syce3B5KM66 Zfyve21-204ENSMUST00000221375 1265 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Xpa-201ENSMUST00000030013 955 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Lamtor4-201ENSMUST00000062067 877 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Fgf9-202ENSMUST00000074654 1198 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Celf3-201ENSMUST00000029784 2744 ntAPPRIS P2 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Slc11a2-201ENSMUST00000023774 3025 ntAPPRIS P3 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Gak-201ENSMUST00000046603 4453 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 AW209491-202ENSMUST00000178289 2035 ntAPPRIS P1 TSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Gm14168-201ENSMUST00000144818 2197 ntTSL 1 (best) BASIC16.5■□□□□ 0.23
Syce3B5KM66 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC16.49■□□□□ 0.23
Syce3B5KM66 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Fut9-202ENSMUST00000108199 2579 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Slc25a3-206ENSMUST00000170810 1341 ntAPPRIS ALT2 TSL 5 BASIC16.49■□□□□ 0.23
Syce3B5KM66 Grtp1-206ENSMUST00000210317 3013 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Il6ra-201ENSMUST00000029559 3343 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Phka1-201ENSMUST00000043596 5938 ntAPPRIS ALT2 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Sf3a2-203ENSMUST00000148665 2213 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 0610010K14Rik-204ENSMUST00000102569 778 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Gm12895-201ENSMUST00000122214 226 ntBASIC16.49■□□□□ 0.23
Syce3B5KM66 Gm13054-201ENSMUST00000154192 820 ntTSL 3 BASIC16.49■□□□□ 0.23
Syce3B5KM66 AC160338.1-201ENSMUST00000214232 705 ntBASIC16.49■□□□□ 0.23
Syce3B5KM66 Rbfox2-207ENSMUST00000227533 1041 ntBASIC16.49■□□□□ 0.23
Syce3B5KM66 Cort-201ENSMUST00000030815 677 ntAPPRIS P1 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Snx12-201ENSMUST00000077876 1002 ntTSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Cldn19-201ENSMUST00000084309 924 ntAPPRIS P4 TSL 1 (best) BASIC16.49■□□□□ 0.23
Syce3B5KM66 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC16.49■□□□□ 0.23
Syce3B5KM66 Slc8a2-202ENSMUST00000211649 5261 ntAPPRIS P3 TSL 1 (best) BASIC16.49■□□□□ 0.23
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms