Protein–RNA interactions for Protein: B2RVW2

Clrn2, Clarin 2, mousemouse

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Clrn2B2RVW2 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Zfp57-202ENSMUST00000089968 1991 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Plxnc1-201ENSMUST00000099337 7302 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Gm37305-201ENSMUST00000195714 4279 ntBASIC16.65■□□□□ 0.26
Clrn2B2RVW2 AC174678.1-201ENSMUST00000228007 2749 ntBASIC16.65■□□□□ 0.26
Clrn2B2RVW2 1110028F18Rik-201ENSMUST00000183365 1341 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Scara5-202ENSMUST00000069226 3262 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Tmem119-201ENSMUST00000067853 2242 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Kcnt1-213ENSMUST00000198204 4714 ntAPPRIS ALT2 TSL 5 BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Hs3st3b1-201ENSMUST00000094103 4911 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Ica1l-201ENSMUST00000027172 3650 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Gm29340-201ENSMUST00000188763 3854 ntBASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Tex44-201ENSMUST00000046004 1724 ntAPPRIS P1 BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Nap1l4-206ENSMUST00000208190 2259 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Clrn2B2RVW2 Prkar2b-202ENSMUST00000036497 3378 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clrn2B2RVW2 Gm31774-201ENSMUST00000212910 1366 ntTSL 1 (best) BASIC16.64■□□□□ 0.26
Clrn2B2RVW2 Lrrc45-201ENSMUST00000026139 2492 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clrn2B2RVW2 Adm-201ENSMUST00000033054 1390 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clrn2B2RVW2 Hace1-201ENSMUST00000037044 3785 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clrn2B2RVW2 Prmt5-201ENSMUST00000023873 2691 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.26
Clrn2B2RVW2 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Sacm1l-201ENSMUST00000026270 3558 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Ankzf1-201ENSMUST00000127625 1167 ntTSL 5 BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 2210408F21Rik-214ENSMUST00000155345 1022 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Gm15853-201ENSMUST00000160268 556 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Olfr455-201ENSMUST00000171307 954 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Gm42921-201ENSMUST00000196670 655 ntTSL 2 BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Sidt2-201ENSMUST00000038488 4248 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 AC154527.2-201ENSMUST00000225256 1466 ntBASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Map2k7-211ENSMUST00000145165 2879 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Parm1-201ENSMUST00000040576 5068 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Klc4-201ENSMUST00000003642 2322 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Urm1-201ENSMUST00000091142 2196 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Ephb1-201ENSMUST00000035129 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Tmem101-201ENSMUST00000021296 1574 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Gm42632-201ENSMUST00000201707 2411 ntBASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Isoc2a-201ENSMUST00000125249 2244 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.25
Clrn2B2RVW2 Nfkbid-201ENSMUST00000046177 2039 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Scaf4-201ENSMUST00000039280 4165 ntAPPRIS P3 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Ccnj-203ENSMUST00000120057 3783 ntTSL 5 BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Cactin-201ENSMUST00000050867 2715 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Mrpl58-203ENSMUST00000106539 2522 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Rpn2-201ENSMUST00000029171 2621 ntTSL 5 BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Gm11425-201ENSMUST00000119608 498 ntBASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Rpl12-203ENSMUST00000126610 1242 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Krtap16-3-201ENSMUST00000179707 601 ntAPPRIS P1 BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Gm17795-201ENSMUST00000214505 757 ntBASIC16.63■□□□□ 0.25
Clrn2B2RVW2 AC153962.4-201ENSMUST00000217878 242 ntBASIC16.63■□□□□ 0.25
Clrn2B2RVW2 AC150560.1-201ENSMUST00000227731 1187 ntBASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Mettl26-201ENSMUST00000026827 817 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Tmem219-201ENSMUST00000032926 941 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Dpm3-201ENSMUST00000040824 404 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Gm9396-201ENSMUST00000076703 567 ntBASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Abhd3-203ENSMUST00000117828 1962 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Specc1-210ENSMUST00000201723 2690 ntTSL 5 BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Ano10-201ENSMUST00000042546 2653 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Dctn1-201ENSMUST00000077407 4118 ntAPPRIS ALT2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Rfx5-202ENSMUST00000107253 4367 ntTSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Slco3a1-202ENSMUST00000098371 2709 ntAPPRIS ALT1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Pttg1ip-201ENSMUST00000009435 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Rita1-201ENSMUST00000031599 1573 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Gm42690-201ENSMUST00000197921 1836 ntBASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Hspb8-201ENSMUST00000036991 1816 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Opn5-201ENSMUST00000068355 1824 ntAPPRIS P1 TSL 1 (best) BASIC16.63■□□□□ 0.25
Clrn2B2RVW2 Synj2-210ENSMUST00000115791 5051 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Vangl2-201ENSMUST00000027837 5698 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Fzd7-201ENSMUST00000114246 4532 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Pgm1-201ENSMUST00000087324 2369 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Agap1-204ENSMUST00000190096 4078 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Gamt-202ENSMUST00000105363 988 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Pdpn-202ENSMUST00000119654 762 ntAPPRIS ALT2 TSL 3 BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Gm12882-201ENSMUST00000121696 517 ntBASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 B230217C12Rik-204ENSMUST00000170806 1118 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Gm11214-201ENSMUST00000184252 552 ntAPPRIS P1 BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 2810429I04Rik-210ENSMUST00000189464 868 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Gm5279-201ENSMUST00000199575 745 ntBASIC16.62■□□□□ 0.25
Clrn2B2RVW2 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Pogk-204ENSMUST00000135673 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Ripk3-203ENSMUST00000178399 1865 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Trpc3-201ENSMUST00000029271 3694 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Gm29374-201ENSMUST00000187198 1340 ntTSL 3 BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Tbc1d16-203ENSMUST00000207655 2855 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Dlgap1-207ENSMUST00000133983 7173 ntAPPRIS ALT2 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Lrrc7-204ENSMUST00000199890 6326 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Ptprm-202ENSMUST00000223982 4802 ntAPPRIS P2 BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 Acadm-201ENSMUST00000072697 2047 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
Clrn2B2RVW2 9430015G10Rik-208ENSMUST00000169550 2660 ntAPPRIS P1 TSL 5 BASIC16.62■□□□□ 0.25
Retrieved 100 of 76,532 protein–RNA pairs in 48 ms