Protein–RNA interactions for Protein: A6BLY7

Krt28, Keratin, type I cytoskeletal 28, mousemouse

Predictions only

Length 462 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Krt28A6BLY7 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Krt28A6BLY7 Gm9252-201ENSMUST00000172364 1602 ntBASIC15.9■□□□□ 0.14
Krt28A6BLY7 Slc4a5-202ENSMUST00000113899 5039 ntAPPRIS ALT2 TSL 5 BASIC15.9■□□□□ 0.14
Krt28A6BLY7 Phf7-201ENSMUST00000022459 2084 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Krt28A6BLY7 Gm10501-201ENSMUST00000151136 2200 ntTSL 2 BASIC15.9■□□□□ 0.14
Krt28A6BLY7 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC15.9■□□□□ 0.14
Krt28A6BLY7 Mars-206ENSMUST00000171564 2962 ntTSL 5 BASIC15.9■□□□□ 0.14
Krt28A6BLY7 Pmpca-201ENSMUST00000076431 3135 ntAPPRIS P1 TSL 1 (best) BASIC15.9■□□□□ 0.14
Krt28A6BLY7 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.14
Krt28A6BLY7 Nap1l1-203ENSMUST00000217908 1350 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Nat3-201ENSMUST00000070514 1395 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Ppard-201ENSMUST00000002320 3218 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Pxk-205ENSMUST00000225653 2765 ntAPPRIS P2 BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Foxp4-203ENSMUST00000113263 3156 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Lims1-203ENSMUST00000105468 1205 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Zbtb32-201ENSMUST00000108150 854 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Fbxw11-203ENSMUST00000109366 3821 ntAPPRIS ALT1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Gm15957-201ENSMUST00000118893 974 ntBASIC15.89■□□□□ 0.13
Krt28A6BLY7 4933427I22Rik-201ENSMUST00000138672 393 ntTSL 3 BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Gm8801-201ENSMUST00000173255 1064 ntBASIC15.89■□□□□ 0.13
Krt28A6BLY7 Mir3102-201ENSMUST00000175555 104 ntBASIC15.89■□□□□ 0.13
Krt28A6BLY7 Gm5370-201ENSMUST00000187187 574 ntBASIC15.89■□□□□ 0.13
Krt28A6BLY7 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Gm43094-201ENSMUST00000196549 921 ntBASIC15.89■□□□□ 0.13
Krt28A6BLY7 Gm19078-201ENSMUST00000206311 727 ntBASIC15.89■□□□□ 0.13
Krt28A6BLY7 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Atp5d-201ENSMUST00000003156 931 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 9430041J12Rik-201ENSMUST00000050989 534 ntBASIC15.89■□□□□ 0.13
Krt28A6BLY7 Gemin7-201ENSMUST00000051364 763 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Ikbke-204ENSMUST00000161764 2867 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Clstn1-202ENSMUST00000105691 4459 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Caln1-203ENSMUST00000111288 9327 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Unc93b1-204ENSMUST00000165711 1991 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Nsd3-204ENSMUST00000139966 5261 ntAPPRIS ALT2 TSL 5 BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Wbp2nl-201ENSMUST00000023089 1318 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Fam184a-201ENSMUST00000020003 4164 ntAPPRIS P1 TSL 5 BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Eef1d-204ENSMUST00000089681 2152 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Add1-204ENSMUST00000114338 4007 ntAPPRIS ALT2 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Dclk2-201ENSMUST00000029719 4012 ntAPPRIS P3 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Zc3h14-204ENSMUST00000110105 3514 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 A430035B10Rik-204ENSMUST00000148063 2010 ntTSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Nov-201ENSMUST00000050027 2869 ntAPPRIS P1 TSL 1 (best) BASIC15.89■□□□□ 0.13
Krt28A6BLY7 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Dcakd-201ENSMUST00000021313 1744 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Grik2-210ENSMUST00000220263 2085 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Slc32a1-201ENSMUST00000045738 2797 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Car7-202ENSMUST00000159416 1943 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Lmbr1-204ENSMUST00000198105 2274 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Kmt5b-208ENSMUST00000113977 6002 ntAPPRIS P3 TSL 5 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Golga5-201ENSMUST00000021609 3390 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Ubr3-201ENSMUST00000055758 8072 ntAPPRIS P2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Ccnt2-202ENSMUST00000112570 4511 ntAPPRIS ALT2 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Heyl-201ENSMUST00000040821 4537 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Gm5187-201ENSMUST00000117317 991 ntBASIC15.88■□□□□ 0.13
Krt28A6BLY7 Fzr1-202ENSMUST00000118812 1215 ntTSL 5 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Gm11524-201ENSMUST00000119349 807 ntBASIC15.88■□□□□ 0.13
Krt28A6BLY7 Drap1-210ENSMUST00000148219 727 ntTSL 3 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Gm12840-201ENSMUST00000156081 627 ntTSL 5 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Gm37047-201ENSMUST00000191992 533 ntTSL 5 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Gm40466-201ENSMUST00000212174 422 ntBASIC15.88■□□□□ 0.13
Krt28A6BLY7 Rrp36-201ENSMUST00000024766 1195 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Csrp3-201ENSMUST00000032658 877 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Mdk-203ENSMUST00000090602 714 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Scamp1-201ENSMUST00000022197 4259 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Sox14-201ENSMUST00000054819 2065 ntAPPRIS P1 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Oprm1-202ENSMUST00000052751 1334 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Oprm1-207ENSMUST00000092731 1332 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Osbpl1a-208ENSMUST00000121888 2674 ntTSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Tbx6-201ENSMUST00000094037 1727 ntAPPRIS P1 TSL 1 (best) BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Zfx-204ENSMUST00000113927 6933 ntAPPRIS P1 TSL 5 BASIC15.88■□□□□ 0.13
Krt28A6BLY7 Dlx1-201ENSMUST00000037119 4111 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Dnmt3b-210ENSMUST00000109774 4320 ntAPPRIS P4 TSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 D1Pas1-201ENSMUST00000045108 3212 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Zfp422-203ENSMUST00000112880 2523 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Impad1-201ENSMUST00000084949 6543 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Gm6588-201ENSMUST00000100882 2313 ntAPPRIS P1 BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Srp68-202ENSMUST00000106425 2330 ntTSL 5 BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Tmem53-202ENSMUST00000106433 913 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Zcchc17-202ENSMUST00000134159 2113 ntAPPRIS P1 TSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Gm4959-201ENSMUST00000197271 1044 ntBASIC15.87■□□□□ 0.13
Krt28A6BLY7 Gm42442-201ENSMUST00000197951 1133 ntBASIC15.87■□□□□ 0.13
Krt28A6BLY7 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Gm20083-202ENSMUST00000206663 1008 ntTSL 1 (best) BASIC15.87■□□□□ 0.13
Krt28A6BLY7 Gm34084-201ENSMUST00000222236 1298 ntTSL 5 BASIC15.87■□□□□ 0.13
Retrieved 100 of 76,532 protein–RNA pairs in 58.1 ms