Protein–RNA interactions for Protein: A0A1B0GSS6

Gm3854, Predicted gene 3854, mousemouse

Predictions only

Length 495 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gm3854A0A1B0GSS6 P3h1-204ENSMUST00000121111 3188 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Fubp3-202ENSMUST00000113482 3268 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Med15-202ENSMUST00000080936 3263 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm10516-201ENSMUST00000180598 2615 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Rarg-202ENSMUST00000063339 2718 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Syne3-201ENSMUST00000067005 5097 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Lpcat2-201ENSMUST00000046290 2811 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Pcdha2-201ENSMUST00000115662 5361 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Gm3854A0A1B0GSS6 Dnm2-211ENSMUST00000173397 3510 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm9252-201ENSMUST00000172364 1602 ntBASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Sec31a-201ENSMUST00000094578 4228 ntAPPRIS P2 TSL 5 BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 4930459C07Rik-202ENSMUST00000219638 1805 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Synrg-201ENSMUST00000049714 3995 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm14780-201ENSMUST00000118387 2737 ntBASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Mettl26-203ENSMUST00000163356 534 ntTSL 5 BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 AC155286.1-201ENSMUST00000218632 448 ntBASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Gopc-201ENSMUST00000020008 4216 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Arhgef10l-206ENSMUST00000105799 4508 ntAPPRIS ALT2 TSL 5 BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm20743-201ENSMUST00000191735 1576 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Mcrs1-202ENSMUST00000163506 1795 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Tjp2-201ENSMUST00000099558 4591 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Sez6-202ENSMUST00000093995 4239 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 St3gal3-202ENSMUST00000097912 2143 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Arhgap40-203ENSMUST00000165398 2028 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Aurka-202ENSMUST00000109139 1905 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Aurka-201ENSMUST00000028997 1905 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Pbk-201ENSMUST00000022612 1720 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Gm3854A0A1B0GSS6 D630044L22Rik-201ENSMUST00000181174 2964 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Tm9sf1-204ENSMUST00000121937 2398 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Paqr9-201ENSMUST00000079597 8367 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Rxrg-203ENSMUST00000111384 1967 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Tcf3-210ENSMUST00000105346 2839 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Iqsec3-201ENSMUST00000046373 6840 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Foxl2-201ENSMUST00000051312 3256 ntAPPRIS P1 BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm16201-202ENSMUST00000139218 2330 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Pou5f1-201ENSMUST00000025271 1362 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Smarcd1-201ENSMUST00000023759 3153 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Rbm22-201ENSMUST00000025506 2210 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Usp51-201ENSMUST00000095755 2204 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 1700037H04Rik-202ENSMUST00000103188 1241 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Sec11a-202ENSMUST00000117383 1094 ntTSL 2 BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm11574-201ENSMUST00000139752 946 ntTSL 5 BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm10275-202ENSMUST00000168697 495 ntBASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm26600-201ENSMUST00000181637 1256 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Il13-201ENSMUST00000020650 1205 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Coprs-202ENSMUST00000209371 601 ntTSL 3 BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Cradd-202ENSMUST00000217809 1115 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm19220-201ENSMUST00000222682 803 ntBASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 AC149294.4-201ENSMUST00000227870 882 ntBASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Tpm4-201ENSMUST00000003575 2128 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Gm10275-201ENSMUST00000092620 635 ntBASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Plcb3-201ENSMUST00000025912 4201 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Gpank1-202ENSMUST00000165306 1518 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Fbxo44-205ENSMUST00000151127 1403 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Krt25-201ENSMUST00000038004 1989 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Prrt2-201ENSMUST00000159916 2501 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Gm3854A0A1B0GSS6 Ptpn6-202ENSMUST00000112484 2219 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Fbxo46-202ENSMUST00000165913 2498 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Myg1-202ENSMUST00000113682 1480 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Strn4-202ENSMUST00000108495 3082 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Hps1-201ENSMUST00000026194 2647 ntAPPRIS P3 TSL 5 BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Zdhhc18-201ENSMUST00000084238 4580 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Erich6-201ENSMUST00000041115 2195 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Wdyhv1-201ENSMUST00000067563 1383 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Sike1-201ENSMUST00000029447 7375 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Stk40-201ENSMUST00000094761 3492 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Ccdc169-203ENSMUST00000118963 740 ntTSL 3 BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Atcayos-202ENSMUST00000129950 1117 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Ccdc169-202ENSMUST00000061099 887 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Reps2-202ENSMUST00000112334 7675 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Ece2-204ENSMUST00000133344 3042 ntAPPRIS ALT1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 BC037039-201ENSMUST00000192003 2205 ntBASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Slit1-202ENSMUST00000166496 4556 ntTSL 5 BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Zic4-209ENSMUST00000173933 1764 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Gapdh-203ENSMUST00000118875 1420 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Prok2-202ENSMUST00000032152 1423 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Dnajc2-203ENSMUST00000115193 2416 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Gm3854A0A1B0GSS6 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Gm36839-201ENSMUST00000222088 2093 ntTSL 5 BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Il18r1-204ENSMUST00000193391 1738 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
Gm3854A0A1B0GSS6 Acot4-201ENSMUST00000021652 6203 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 33.7 ms