Protein–RNA interactions for Protein: A0A0G2JFX3

Trav13d-4, T cell receptor alpha variable 13D-4 (Fragment), mousemouse

Predictions only

Length 110 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav13d-4A0A0G2JFX3 Nrip2-202ENSMUST00000120405 1468 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Fam174a-202ENSMUST00000186780 3460 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Eldr-203ENSMUST00000130392 1540 ntTSL 2 BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 AC130669.1-201ENSMUST00000228537 1672 ntBASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Disp2-204ENSMUST00000110846 1732 ntTSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rsrp1-201ENSMUST00000078084 1749 ntAPPRIS P1 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC9.96□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Fundc1-201ENSMUST00000026016 1983 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tmem251-201ENSMUST00000057416 3367 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rgs6-203ENSMUST00000185665 2201 ntAPPRIS P4 TSL 5 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Mme-206ENSMUST00000194150 3345 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Zfp862-ps-204ENSMUST00000204484 6065 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 B9d2-201ENSMUST00000108403 1021 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tmem9-205ENSMUST00000165125 901 ntAPPRIS P1 TSL 3 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Timm9-202ENSMUST00000166120 990 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tmem270-202ENSMUST00000201316 847 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm44202-201ENSMUST00000203549 532 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Timm9-207ENSMUST00000221559 718 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Timm9-209ENSMUST00000221815 1193 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rpl8-201ENSMUST00000004072 862 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tmem242-201ENSMUST00000005053 948 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Spr-ps1-201ENSMUST00000089584 605 ntBASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ccdc24-201ENSMUST00000106422 1365 ntTSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm18856-201ENSMUST00000178096 1374 ntBASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pcdha11-203ENSMUST00000192447 4583 ntAPPRIS ALT2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Fhdc1-205ENSMUST00000194027 1648 ntTSL 5 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dbndd1-201ENSMUST00000176155 1677 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cyp4f18-201ENSMUST00000003574 1702 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Zscan12-202ENSMUST00000099720 2182 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gdap1l1-201ENSMUST00000018087 2220 ntAPPRIS P2 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Bet1l-201ENSMUST00000026557 2268 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Zkscan4-201ENSMUST00000062609 2400 ntAPPRIS P1 TSL 2 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm28182-201ENSMUST00000188354 2477 ntBASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Nfatc4-204ENSMUST00000226357 2680 ntAPPRIS ALT2 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm10125-203ENSMUST00000161096 3493 ntTSL 3 BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC9.95□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pgr-204ENSMUST00000189181 6889 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cpeb3-204ENSMUST00000126188 4224 ntAPPRIS ALT2 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Chaf1a-201ENSMUST00000002914 3308 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Dlg4-204ENSMUST00000108589 3271 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm43738-201ENSMUST00000200659 2635 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 5033426O07Rik-202ENSMUST00000212635 2110 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Wdr73-201ENSMUST00000026816 2114 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Map2k6-201ENSMUST00000020949 2068 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ankrd27-202ENSMUST00000186245 1926 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rabggta-202ENSMUST00000163889 1886 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pitx2-203ENSMUST00000106382 1757 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Mycbpap-201ENSMUST00000040692 1512 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Fkbp10-202ENSMUST00000107400 1467 ntTSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rcn3-201ENSMUST00000019683 1462 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Rcn3-208ENSMUST00000211352 1453 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Zfhx2os-202ENSMUST00000183750 4375 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Bcl7b-203ENSMUST00000111188 1434 ntAPPRIS ALT1 TSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Pou2f2-203ENSMUST00000108415 7095 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Mtg2-201ENSMUST00000087563 1346 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Zkscan8-202ENSMUST00000110481 728 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm15173-201ENSMUST00000122049 433 ntBASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm15952-201ENSMUST00000122858 490 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 4930481B07Rik-201ENSMUST00000128160 1089 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm11467-201ENSMUST00000129407 674 ntTSL 3 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 A930006K02Rik-201ENSMUST00000149172 776 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Gm43347-201ENSMUST00000200226 580 ntBASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Fosb-206ENSMUST00000208446 1090 ntTSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Timm10b-211ENSMUST00000210350 529 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ahnak-201ENSMUST00000092955 1046 ntAPPRIS ALT2 TSL 2 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Apol7d-201ENSMUST00000097699 826 ntTSL 2 BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Spg20-201ENSMUST00000044116 3770 ntAPPRIS P3 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 A930004D18Rik-201ENSMUST00000066163 3217 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Trav13d-4A0A0G2JFX3 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC9.94□□□□□ -0.82
Retrieved 100 of 76,532 protein–RNA pairs in 75.9 ms