Protein–RNA interactions for Protein: A0A075B656

Trav18, T cell receptor alpha variable 18 (Fragment), mousemouse

Predictions only

Length 109 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav18A0A075B656 Gm4262-201ENSMUST00000180624 1986 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Me1-201ENSMUST00000034989 3288 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Skap1-205ENSMUST00000107662 1861 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC11.84□□□□□ -0.51
Trav18A0A075B656 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Ociad2-205ENSMUST00000201908 2378 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Fam208b-201ENSMUST00000096069 8338 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 8430429K09Rik-204ENSMUST00000146456 1675 ntTSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Slc27a1-201ENSMUST00000034267 2795 ntAPPRIS P1 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Traf2-201ENSMUST00000028311 3044 ntAPPRIS P3 TSL 1 (best) BASIC11.84□□□□□ -0.51
Trav18A0A075B656 Elf4-202ENSMUST00000114958 6088 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav18A0A075B656 Elovl1-201ENSMUST00000006557 1811 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav18A0A075B656 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav18A0A075B656 Synm-202ENSMUST00000074233 7818 ntAPPRIS P4 TSL 1 (best) BASIC11.83□□□□□ -0.51
Trav18A0A075B656 Ptprn2-201ENSMUST00000070733 3201 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Adprhl1-201ENSMUST00000033825 1372 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Gm17315-201ENSMUST00000181408 2504 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Hpcal1-201ENSMUST00000071858 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Rps19-201ENSMUST00000108428 1284 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Gm16198-201ENSMUST00000118766 670 ntBASIC11.83□□□□□ -0.52
Trav18A0A075B656 Frs3os-201ENSMUST00000136531 978 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Gm15758-201ENSMUST00000161681 695 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Avpi1-201ENSMUST00000018965 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Gm30097-202ENSMUST00000194580 329 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 AC084391.1-201ENSMUST00000200651 141 ntBASIC11.83□□□□□ -0.52
Trav18A0A075B656 Pard6a-204ENSMUST00000212352 1234 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Zfyve21-206ENSMUST00000222843 705 ntTSL 3 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Rab33a-201ENSMUST00000033430 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Rnf7-202ENSMUST00000071301 334 ntTSL 2 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Prdm5-203ENSMUST00000081219 984 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Tepsin-203ENSMUST00000106225 2566 ntAPPRIS ALT2 TSL 5 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Dlgap3-201ENSMUST00000046659 3884 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Gpr137-205ENSMUST00000166115 1845 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Nfkbia-201ENSMUST00000021413 1578 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Gm2895-201ENSMUST00000171591 3194 ntTSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Oser1-202ENSMUST00000104954 1702 ntAPPRIS P1 TSL 1 (best) BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Tcf4-248ENSMUST00000202354 2120 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Tcf4-257ENSMUST00000202772 2125 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC11.83□□□□□ -0.52
Trav18A0A075B656 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Rasal3-207ENSMUST00000137458 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Abhd16b-201ENSMUST00000069649 1775 ntAPPRIS P1 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Tmem38b-201ENSMUST00000030127 2862 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Fam57b-203ENSMUST00000205324 1915 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Dtd1-201ENSMUST00000028917 1350 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Vdac3-201ENSMUST00000009036 1354 ntAPPRIS P2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Scarf1-202ENSMUST00000118243 2617 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Thnsl2-202ENSMUST00000160918 2077 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Eif4g3-215ENSMUST00000203828 5289 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 AC154527.4-201ENSMUST00000224364 1667 ntBASIC11.82□□□□□ -0.52
Trav18A0A075B656 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Lzts1-201ENSMUST00000037049 1800 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Knop1-204ENSMUST00000106550 5524 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Meig1-203ENSMUST00000115082 603 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Dnajc2-202ENSMUST00000115192 1132 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Mras-202ENSMUST00000119472 1190 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Gm11750-201ENSMUST00000146016 583 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Gm13563-202ENSMUST00000150375 851 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Ly6g6e-204ENSMUST00000172959 501 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Rab10os-206ENSMUST00000179908 746 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Gm29520-201ENSMUST00000191209 1067 ntTSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Gm2272-201ENSMUST00000194903 582 ntBASIC11.82□□□□□ -0.52
Trav18A0A075B656 Gm43397-201ENSMUST00000196422 481 ntTSL 3 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 CR974585.1-201ENSMUST00000221790 1263 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Slc17a9-201ENSMUST00000094218 2275 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Cldn11-201ENSMUST00000046174 1870 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 3110082I17Rik-204ENSMUST00000198474 2030 ntTSL 2 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Osbpl8-201ENSMUST00000095310 3622 ntAPPRIS P3 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Cbfb-203ENSMUST00000109394 2487 ntTSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Rundc1-201ENSMUST00000040561 3223 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Fhod3-201ENSMUST00000037097 5408 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Tle3-215ENSMUST00000162583 4299 ntAPPRIS ALT1 TSL 5 BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Rhbdl3-201ENSMUST00000017836 3736 ntAPPRIS P1 TSL 1 (best) BASIC11.82□□□□□ -0.52
Trav18A0A075B656 Rnf168-201ENSMUST00000014218 3932 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Dennd5b-201ENSMUST00000111557 9831 ntAPPRIS P1 TSL 5 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Ada-201ENSMUST00000017841 1688 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Tbl1xr1-203ENSMUST00000193734 8237 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Ltbp4-203ENSMUST00000118583 4726 ntAPPRIS ALT2 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
Trav18A0A075B656 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms