Protein–RNA interactions for Protein: A0A075B652

Trav5-4, T cell receptor alpha variable 5-4 (Fragment), mousemouse

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trav5-4A0A075B652 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Mettl2-201ENSMUST00000021030 1867 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Gm39244-202ENSMUST00000210837 1857 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Fgd4-211ENSMUST00000162671 2714 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Mtif2-202ENSMUST00000093239 2741 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Dusp3-205ENSMUST00000143177 391 ntTSL 3 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Caly-202ENSMUST00000166758 1220 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 2010010A06Rik-203ENSMUST00000190465 650 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 AC155714.1-201ENSMUST00000214033 956 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Gm16845-202ENSMUST00000216270 567 ntTSL 2 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 5430427M07Rik-202ENSMUST00000221524 1023 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Neurl2-201ENSMUST00000042775 1014 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Chchd2-201ENSMUST00000094280 915 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Cblb-204ENSMUST00000227062 3728 ntAPPRIS P2 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Prpf31-202ENSMUST00000108636 1798 ntTSL 5 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Taz-202ENSMUST00000114180 1786 ntAPPRIS ALT1 TSL 5 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Pcsk4-201ENSMUST00000020340 2539 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Htatip2-201ENSMUST00000085272 1418 ntAPPRIS P3 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Pdia2-202ENSMUST00000120333 1661 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Gm16029-201ENSMUST00000161643 2427 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Aldh16a1-201ENSMUST00000107815 2685 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Gli1-201ENSMUST00000026474 4057 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Gm4756-202ENSMUST00000208039 2344 ntAPPRIS P1 TSL 5 BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Csnk1g2-202ENSMUST00000085435 1825 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Gm8096-201ENSMUST00000209921 1591 ntBASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Derl3-202ENSMUST00000217811 1316 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Iqce-202ENSMUST00000077890 2494 ntAPPRIS ALT2 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 AC153366.2-201ENSMUST00000219461 1984 ntBASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Gm28551-201ENSMUST00000144660 3142 ntAPPRIS P1 TSL 1 (best) BASIC12.09□□□□□ -0.47
Trav5-4A0A075B652 Etl4-207ENSMUST00000114610 2863 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav5-4A0A075B652 Pdia2-201ENSMUST00000039113 1721 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav5-4A0A075B652 Nkapl-201ENSMUST00000068235 1463 ntAPPRIS P1 BASIC12.08□□□□□ -0.47
Trav5-4A0A075B652 Bak1-202ENSMUST00000078691 2387 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.47
Trav5-4A0A075B652 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC12.08□□□□□ -0.47
Trav5-4A0A075B652 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Pld3-201ENSMUST00000117095 2282 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Dnase1l2-202ENSMUST00000119932 1629 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Pus1-204ENSMUST00000112426 1389 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Pth2r-201ENSMUST00000027083 2414 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Endov-202ENSMUST00000106244 5070 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Eef2kmt-201ENSMUST00000064635 2170 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Pcdh7-203ENSMUST00000191837 8785 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 A730062M13Rik-201ENSMUST00000192843 1910 ntBASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Necap2-201ENSMUST00000030760 1906 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Rplp2-203ENSMUST00000106004 421 ntAPPRIS P1 TSL 2 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Ptpa-208ENSMUST00000131476 989 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 4930570G19Rik-204ENSMUST00000149387 986 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Hsf4-203ENSMUST00000172525 1276 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 5430405H02Rik-203ENSMUST00000185402 904 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Zfp787-206ENSMUST00000208746 535 ntTSL 2 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Manbal-201ENSMUST00000081202 1107 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Hist1h4j-201ENSMUST00000087714 774 ntAPPRIS P1 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Rogdi-202ENSMUST00000090453 652 ntTSL 5 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Prkcz-201ENSMUST00000030922 2641 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Cacna1g-207ENSMUST00000107789 8383 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Fbrs-202ENSMUST00000205432 4166 ntAPPRIS ALT2 TSL 5 BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Gnpat-201ENSMUST00000034466 2984 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 5830432E09Rik-203ENSMUST00000210953 2428 ntTSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Lamb2-201ENSMUST00000065014 5629 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Tex13a-201ENSMUST00000096314 1317 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Eif2d-202ENSMUST00000068805 2009 ntAPPRIS ALT2 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Ankra2-208ENSMUST00000226100 1476 ntBASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Csdc2-201ENSMUST00000038757 2490 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC12.08□□□□□ -0.48
Trav5-4A0A075B652 Phactr3-201ENSMUST00000103065 2642 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Rhpn1-201ENSMUST00000023244 1932 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Osbpl11-201ENSMUST00000039733 4520 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Pank4-201ENSMUST00000030931 2508 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Repin1-201ENSMUST00000009420 3145 ntAPPRIS P3 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 9330182L06Rik-202ENSMUST00000115348 3403 ntAPPRIS ALT2 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Vwa2-201ENSMUST00000026068 4049 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Xpot-201ENSMUST00000039810 5992 ntTSL 5 BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Foxo4-201ENSMUST00000062000 3162 ntAPPRIS P1 TSL 1 (best) BASIC12.07□□□□□ -0.48
Trav5-4A0A075B652 Dgki-202ENSMUST00000090314 3784 ntAPPRIS ALT2 TSL 5 BASIC12.07□□□□□ -0.48
Retrieved 100 of 76,532 protein–RNA pairs in 26.9 ms